Tissue expression of SPIRE1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	58.6	TPM
GTEx:	16.3	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Not detected
Neuronal cells:	Medium
Neuropil:	Low

Antibody staining	Antibody HPA040737	Antibody HPA040942
Endothelial cells	Not detected	Not detected
Glial cells	Low	Not detected
Neuronal cells	Medium	Medium
Neuropil	Low	Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	58.6

Male, age 5

Sample 1
TPM: 49.2

Female, age 40

Sample 2
TPM: 80.4

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 46.1

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	16.3

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 15.4

Samples: 114

Max RPKM: 26
Min RPKM: 10
Std RPKM: 2.6
Median RPKM: 14.8

GTEX-X4XX-3026-SM-3NMB2

26.0

GTEX-PVOW-2526-SM-2XCF7

24.1

GTEX-UTHO-3026-SM-3GAFB

22.7

GTEX-QMR6-1426-SM-32PLA

21.8

GTEX-WWYW-3126-SM-3NB39

21.3

GTEX-13IVO-2926-SM-5L3CZ

20.4

GTEX-QVJO-1426-SM-2S1QY

20.3

GTEX-ZAK1-3026-SM-5S2MJ

19.4

Show all

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 17.3

Samples: 108

Max RPKM: 28.1
Min RPKM: 7.5
Std RPKM: 3.8
Median RPKM: 17.2

GTEX-QDT8-0011-R10A-SM-32PKG

28.1

GTEX-X4XX-0011-R10B-SM-46MWO

26.8

GTEX-QVJO-0011-R10A-SM-2S1QJ

25.9

GTEX-WWYW-0011-R10A-SM-3NB35

25.4

GTEX-S7SE-0011-R10A-SM-2XCDF

24.7

GTEX-T6MN-0011-R10A-SM-32QP7

23.8

GTEX-NL3H-0011-R10A-SM-2I3E9

23.7

GTEX-Q2AG-0011-R10A-SM-2HMLA

23.4

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue