We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RIT1
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:14.9TPM
GTEx:8.5RPKM
FANTOM5:15.7Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA053249

 

Adipocytes

Not detected  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 
 

BREAST - HPA RNA-seq

Average TPM

14.9

overview Female, age 52
Sample 1
TPM: 11.9
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 14.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 20.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 13.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

8.5

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 8.5
Samples: 214

Max RPKM: 16.6
Min RPKM: 4.7
Std RPKM: 2.2
Median RPKM: 8.2
GTEX-S7SE-0826-SM-4AT4D 16.6
GTEX-ZYFC-0826-SM-5E44K 16.3
GTEX-VJWN-0726-SM-3GIJ8 16.1
GTEX-UTHO-1026-SM-3GAF7 15.5
GTEX-T2YK-2226-SM-32QPT 14.6
GTEX-144GL-2026-SM-5LU3O 14.0
GTEX-14753-2426-SM-5LU8U 13.3
GTEX-WOFL-0826-SM-3MJG1 13.3
GTEX-13O3Q-2226-SM-5KM4O 13.2
GTEX-UPK5-2326-SM-3P5Z8 13.0
GTEX-13W46-0826-SM-5LU3H 12.4
GTEX-1313W-0826-SM-5EQ4T 12.2
GTEX-W5X1-2326-SM-3GIL6 12.1
GTEX-11DXY-2326-SM-5GICW 12.0
GTEX-ZWKS-2826-SM-5NQ74 12.0
GTEX-11O72-2126-SM-5N9FO 11.8
GTEX-11OF3-1926-SM-59889 11.7
GTEX-Q2AG-0326-SM-48U1O 11.7
GTEX-XMD2-0926-SM-4WWEF 11.7
GTEX-11EI6-0626-SM-5985T 11.5
GTEX-11GSO-1926-SM-5A5K3 11.5
GTEX-11NV4-2026-SM-5N9DG 11.5
GTEX-TKQ2-1826-SM-33HB2 11.5
GTEX-ZVT4-1026-SM-57WC4 11.5
GTEX-ZVZQ-0826-SM-51MRF 11.5
GTEX-ZUA1-1526-SM-59HLS 11.4
GTEX-WYVS-1726-SM-3NMAY 11.2
GTEX-11DZ1-0326-SM-5N9BN 11.1
GTEX-13QIC-2326-SM-5LU5N 10.9
GTEX-ZF3C-2326-SM-5S2MZ 10.9
GTEX-12WSM-1726-SM-5BC6J 10.8
GTEX-11ONC-2126-SM-5HL6E 10.7
GTEX-13NZ8-0126-SM-5IJCT 10.7
GTEX-TMMY-0726-SM-33HBE 10.7
GTEX-R53T-1526-SM-48FEK 10.6
GTEX-R55F-1726-SM-2TF4R 10.6
GTEX-S33H-0326-SM-4AD6N 10.6
GTEX-11WQK-2426-SM-5GU5C 10.4
GTEX-U3ZH-1426-SM-4DXSR 10.3
GTEX-11DXW-0626-SM-5N9ER 10.2
GTEX-1269C-2426-SM-5FQSN 10.2
GTEX-T5JC-2126-SM-32PMO 10.2
GTEX-XQ8I-2426-SM-4WAXY 10.2
GTEX-117XS-1926-SM-5GICO 10.1
GTEX-146FH-0826-SM-5SI8T 10.0
GTEX-QVJO-1826-SM-447C9 10.0
GTEX-TML8-1226-SM-32QON 10.0
GTEX-WRHU-0326-SM-3MJFY 10.0
GTEX-XUW1-2326-SM-4BOO5 10.0
GTEX-Y111-2026-SM-4SOJA 9.9
GTEX-ZF2S-2026-SM-5E461 9.9
GTEX-11ZUS-0826-SM-5FQUY 9.8
GTEX-R3RS-0626-SM-48FE1 9.8
GTEX-11GS4-2126-SM-5A5KR 9.6
GTEX-Y5LM-1726-SM-4VDSX 9.6
GTEX-11NSD-0926-SM-5N9DR 9.5
GTEX-1314G-1226-SM-5BC6D 9.5
GTEX-UJHI-1426-SM-3DB9C 9.5
GTEX-WYBS-0926-SM-3NM94 9.5
GTEX-13FTY-2226-SM-5J1ND 9.3
GTEX-13N11-1726-SM-5J1OJ 9.3
GTEX-13O3P-0826-SM-5L3DH 9.3
GTEX-S4P3-1326-SM-4AD6V 9.3
GTEX-SIU7-1626-SM-4BRUK 9.3
GTEX-ZA64-1526-SM-5CVMD 9.3
GTEX-ZXES-0826-SM-5E43C 9.3
GTEX-X261-0626-SM-3NMD9 9.2
GTEX-XMD1-0826-SM-4AT52 9.2
GTEX-145ME-1526-SM-5Q5F2 9.1
GTEX-PSDG-1626-SM-48TCQ 9.1
GTEX-RU72-0626-SM-46MUI 9.1
GTEX-YFCO-1826-SM-4W1YH 9.1
GTEX-ZU9S-1926-SM-5NQBP 9.1
GTEX-13CF2-2026-SM-5K7VI 9.0
GTEX-13NZ9-1026-SM-5MR5K 9.0
GTEX-U3ZN-1926-SM-4DXSG 9.0
GTEX-ZVE2-1226-SM-5NQ8R 9.0
GTEX-XOT4-0726-SM-4GIAW 8.9
GTEX-Y3I4-1526-SM-4TT7K 8.9
GTEX-YFC4-1426-SM-5IFJG 8.9
GTEX-ZZPU-0626-SM-5E43T 8.9
GTEX-1117F-2826-SM-5GZXL 8.8
GTEX-139T8-0826-SM-5L3DE 8.8
GTEX-VUSG-2226-SM-4KKZO 8.8
GTEX-WFON-1826-SM-3GILG 8.8
GTEX-Y8E4-1626-SM-5S2MW 8.8
GTEX-ZV6S-1826-SM-5NQ8D 8.8
GTEX-11P81-1926-SM-5BC53 8.7
GTEX-T6MN-0726-SM-32PML 8.7
GTEX-147F4-2826-SM-5NQBN 8.6
GTEX-14E6E-1326-SM-5S2NR 8.6
GTEX-S32W-2026-SM-4AD6E 8.6
GTEX-YJ8O-2226-SM-5IFHW 8.6
GTEX-ZTX8-1226-SM-4YCE9 8.6
GTEX-111YS-1926-SM-5GICC 8.5
GTEX-132Q8-1426-SM-5EGK7 8.5
GTEX-145MO-0826-SM-5NQBL 8.5
GTEX-ZYT6-0126-SM-5E45J 8.5
GTEX-XQ3S-1326-SM-4BOPQ 8.4
GTEX-12ZZX-1126-SM-5EGKB 8.3
GTEX-132NY-0826-SM-5K7Y7 8.3
GTEX-13FTX-1126-SM-5N9EN 8.3
GTEX-QEL4-2126-SM-447AE 8.3
GTEX-S341-1526-SM-4AD6K 8.3
GTEX-S4Q7-1126-SM-4AD6R 8.3
GTEX-WYJK-1326-SM-3NB2T 8.3
GTEX-ZEX8-2226-SM-57WC6 8.3
GTEX-12KS4-0126-SM-5Q5A5 8.2
GTEX-13113-1726-SM-5GCOO 8.2
GTEX-13OW5-2226-SM-5L3HC 8.2
GTEX-13OW8-0226-SM-5K7UP 8.1
GTEX-X4EP-2926-SM-3P5YQ 8.1
GTEX-11EMC-2026-SM-5A5JV 8.0
GTEX-12WSK-2226-SM-5GCO5 8.0
GTEX-139TU-0626-SM-5KM3X 8.0
GTEX-ZVTK-0326-SM-51MRR 8.0
GTEX-ZY6K-1626-SM-5GZWV 8.0
GTEX-1192X-2326-SM-5987X 7.9
GTEX-XYKS-1326-SM-4BRUN 7.9
GTEX-Y5V5-2126-SM-4WWFO 7.9
GTEX-11PRG-0826-SM-5EQ6A 7.8
GTEX-13D11-1026-SM-5IJFB 7.8
GTEX-WI4N-1426-SM-3LK7H 7.8
GTEX-ZDTT-2126-SM-5S2OJ 7.8
GTEX-11EQ9-1826-SM-5Q5AJ 7.7
GTEX-11WQC-1726-SM-5GU4W 7.7
GTEX-13NZB-2126-SM-5MR4Y 7.7
GTEX-RUSQ-2026-SM-4GIAK 7.7
GTEX-REY6-2426-SM-48FF5 7.6
GTEX-RWS6-1926-SM-47JXY 7.6
GTEX-T2IS-1526-SM-32QPR 7.5
GTEX-Y3IK-2326-SM-4WWDT 7.5
GTEX-ZV7C-1826-SM-5NQ83 7.5
GTEX-13O61-1826-SM-5KM4I 7.4
GTEX-13S86-1226-SM-5S2OA 7.4
GTEX-QDT8-0626-SM-48TYW 7.4
GTEX-WXYG-2226-SM-4E3IM 7.4
GTEX-ZAB4-2526-SM-5HL8M 7.4
GTEX-ZF29-1926-SM-5S2P1 7.4
GTEX-12WSB-0626-SM-59HJO 7.3
GTEX-145MN-1926-SM-5SIAI 7.3
GTEX-XV7Q-2326-SM-4BRVZ 7.3
GTEX-ZT9W-2026-SM-51MRA 7.3
GTEX-131XW-0726-SM-5EGK3 7.2
GTEX-13FHO-0826-SM-5L3E8 7.2
GTEX-13O3O-0826-SM-5K7WE 7.2
GTEX-X15G-1626-SM-3NMB3 7.2
GTEX-XGQ4-0926-SM-4AT4U 7.2
GTEX-ZC5H-2626-SM-5J2MG 7.2
GTEX-ZLV1-1426-SM-4WWES 7.2
GTEX-11P7K-0726-SM-5EGKX 7.1
GTEX-1211K-1926-SM-5EQLB 7.1
GTEX-1122O-1226-SM-5H113 7.0
GTEX-132AR-0826-SM-5EGK6 7.0
GTEX-13PL6-2926-SM-5L3I2 7.0
GTEX-XBED-1626-SM-47JYN 7.0
GTEX-Y9LG-1426-SM-5IFJZ 7.0
GTEX-ZDXO-0126-SM-5S2ND 7.0
GTEX-QEG5-0726-SM-4R1JQ 6.9
GTEX-QMRM-1626-SM-4R1KV 6.9
GTEX-S4UY-0726-SM-4AD6X 6.9
GTEX-T6MO-0326-SM-32QOK 6.9
GTEX-11EM3-1326-SM-5N9C6 6.8
GTEX-145LT-0726-SM-5S2VM 6.8
GTEX-XUJ4-1926-SM-4BOOV 6.8
GTEX-TKQ1-0226-SM-33HB5 6.7
GTEX-ZTTD-1026-SM-51MRD 6.7
GTEX-T5JW-2026-SM-4DM63 6.6
GTEX-X4XY-0926-SM-4E3JD 6.6
GTEX-ZPIC-1126-SM-5BC7F 6.6
GTEX-14ABY-2126-SM-5QGQZ 6.5
GTEX-R55D-0826-SM-48FEA 6.5
GTEX-U8XE-0826-SM-4E3J1 6.5
GTEX-Y8LW-1626-SM-5IFHX 6.5
GTEX-YEC3-1026-SM-5IFI5 6.5
GTEX-ZVT2-1826-SM-5NQ8W 6.5
GTEX-11DXZ-1926-SM-5GZZL 6.4
GTEX-11LCK-2426-SM-5HL5F 6.4
GTEX-11TUW-1826-SM-5BC5D 6.4
GTEX-1399U-1826-SM-5PNZ1 6.4
GTEX-13W3W-1226-SM-5LU4H 6.4
GTEX-SE5C-2126-SM-4BRUJ 6.4
GTEX-U412-1826-SM-4DXTJ 6.3
GTEX-131YS-0626-SM-5EGKL 6.2
GTEX-14AS3-1626-SM-5S2OY 6.2
GTEX-Y114-2026-SM-4TT7L 6.2
GTEX-ZQG8-0726-SM-5P9H9 6.2
GTEX-11I78-2226-SM-5PNYA 6.1
GTEX-12BJ1-1826-SM-5HL9N 6.1
GTEX-Y5V6-2126-SM-4WWFX 6.1
GTEX-ZYWO-2326-SM-5GZY4 6.1
GTEX-13N1W-0626-SM-5MR4U 6.0
GTEX-WY7C-2726-SM-3NB3P 6.0
GTEX-12WSN-1326-SM-5GCNT 5.9
GTEX-13CF3-2126-SM-5IFJP 5.9
GTEX-XMK1-1126-SM-4IHJ8 5.9
GTEX-ZZ64-1226-SM-5E43R 5.9
GTEX-117YX-1426-SM-5H12H 5.8
GTEX-YB5E-1726-SM-5IFJ3 5.8
GTEX-13PVQ-1026-SM-5KM3M 5.7
GTEX-XUZC-1626-SM-4BRVP 5.7
GTEX-133LE-1726-SM-5K7VQ 5.6
GTEX-ZDYS-1126-SM-5K7UB 5.6
GTEX-ZLFU-2126-SM-4WWEV 5.6
GTEX-139T6-1626-SM-5PNYZ 5.5
GTEX-ZYW4-0826-SM-5GIDG 5.5
GTEX-144GM-0926-SM-5O994 5.4
GTEX-13FTW-1426-SM-5LZWZ 5.2
GTEX-ZAJG-0626-SM-5HL8X 5.2
GTEX-11P82-1326-SM-5HL62 5.1
GTEX-11TT1-2126-SM-5GU5Y 4.9
GTEX-11ZTT-2326-SM-5EQLG 4.9
GTEX-YB5K-1626-SM-5IFIN 4.9
GTEX-ZQUD-1926-SM-51MSA 4.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

15.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 15.7
FF:10080-102A8 77 years, female 15.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.