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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:200.6TPM
GTEx:69.2RPKM
FANTOM5:238.0Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA001523

 

Antibody CAB002775

 

Antibody CAB072816

 

Adipocytes

Not detected   Not detected   Low  

Glandular cells

Medium   Low   High  

Myoepithelial cells

Medium   Not detected   Medium  
     
     
     

BREAST - HPA RNA-seq

Average TPM

200.6

overview Female, age 52
Sample 1
TPM: 154.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 95.0
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 261.1
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 291.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

69.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 69.2
Samples: 214

Max RPKM: 232.7
Min RPKM: 27.6
Std RPKM: 26.6
Median RPKM: 63.4
GTEX-11P82-1326-SM-5HL62 232.7
GTEX-132AR-0826-SM-5EGK6 217.1
GTEX-WY7C-2726-SM-3NB3P 174.8
GTEX-11WQK-2426-SM-5GU5C 147.5
GTEX-X4XY-0926-SM-4E3JD 146.3
GTEX-117YX-1426-SM-5H12H 143.1
GTEX-UTHO-1026-SM-3GAF7 131.2
GTEX-RUSQ-2026-SM-4GIAK 128.7
GTEX-13S86-1226-SM-5S2OA 124.6
GTEX-11DZ1-0326-SM-5N9BN 119.7
GTEX-QEG5-0726-SM-4R1JQ 119.6
GTEX-T2YK-2226-SM-32QPT 118.3
GTEX-11TUW-1826-SM-5BC5D 116.5
GTEX-ZTTD-1026-SM-51MRD 114.7
GTEX-X261-0626-SM-3NMD9 107.0
GTEX-QEL4-2126-SM-447AE 105.0
GTEX-SE5C-2126-SM-4BRUJ 100.9
GTEX-REY6-2426-SM-48FF5 99.1
GTEX-13PVQ-1026-SM-5KM3M 97.9
GTEX-11TT1-2126-SM-5GU5Y 95.9
GTEX-13CF3-2126-SM-5IFJP 94.3
GTEX-T5JW-2026-SM-4DM63 93.8
GTEX-U8XE-0826-SM-4E3J1 92.2
GTEX-XYKS-1326-SM-4BRUN 92.0
GTEX-ZLFU-2126-SM-4WWEV 89.9
GTEX-146FH-0826-SM-5SI8T 89.4
GTEX-PSDG-1626-SM-48TCQ 89.0
GTEX-14E6E-1326-SM-5S2NR 88.5
GTEX-YB5K-1626-SM-5IFIN 88.2
GTEX-Y8E4-1626-SM-5S2MW 86.9
GTEX-13NZ8-0126-SM-5IJCT 86.7
GTEX-R55F-1726-SM-2TF4R 86.5
GTEX-ZYWO-2326-SM-5GZY4 86.3
GTEX-13O3O-0826-SM-5K7WE 85.9
GTEX-Y5V6-2126-SM-4WWFX 85.7
GTEX-S4UY-0726-SM-4AD6X 85.4
GTEX-13W3W-1226-SM-5LU4H 84.8
GTEX-VJWN-0726-SM-3GIJ8 84.8
GTEX-ZPIC-1126-SM-5BC7F 84.8
GTEX-13O3Q-2226-SM-5KM4O 84.4
GTEX-13NZ9-1026-SM-5MR5K 84.3
GTEX-ZA64-1526-SM-5CVMD 84.3
GTEX-1211K-1926-SM-5EQLB 83.7
GTEX-13OW5-2226-SM-5L3HC 82.7
GTEX-T6MO-0326-SM-32QOK 82.5
GTEX-13FTX-1126-SM-5N9EN 81.6
GTEX-13O3P-0826-SM-5L3DH 81.2
GTEX-S4Q7-1126-SM-4AD6R 80.9
GTEX-1117F-2826-SM-5GZXL 80.4
GTEX-WOFL-0826-SM-3MJG1 80.4
GTEX-ZC5H-2626-SM-5J2MG 79.6
GTEX-ZQG8-0726-SM-5P9H9 78.9
GTEX-ZU9S-1926-SM-5NQBP 78.9
GTEX-XV7Q-2326-SM-4BRVZ 78.7
GTEX-ZAJG-0626-SM-5HL8X 78.5
GTEX-TKQ1-0226-SM-33HB5 77.0
GTEX-ZTX8-1226-SM-4YCE9 76.3
GTEX-U412-1826-SM-4DXTJ 75.6
GTEX-TMMY-0726-SM-33HBE 74.7
GTEX-VUSG-2226-SM-4KKZO 74.4
GTEX-ZY6K-1626-SM-5GZWV 74.3
GTEX-ZDXO-0126-SM-5S2ND 74.1
GTEX-13W46-0826-SM-5LU3H 74.0
GTEX-R3RS-0626-SM-48FE1 73.9
GTEX-12KS4-0126-SM-5Q5A5 73.5
GTEX-XQ8I-2426-SM-4WAXY 73.5
GTEX-1314G-1226-SM-5BC6D 72.9
GTEX-W5X1-2326-SM-3GIL6 72.9
GTEX-ZT9W-2026-SM-51MRA 72.9
GTEX-XGQ4-0926-SM-4AT4U 72.5
GTEX-X4EP-2926-SM-3P5YQ 72.4
GTEX-12ZZX-1126-SM-5EGKB 72.1
GTEX-144GM-0926-SM-5O994 71.4
GTEX-11ZTT-2326-SM-5EQLG 71.3
GTEX-S32W-2026-SM-4AD6E 71.0
GTEX-1192X-2326-SM-5987X 70.9
GTEX-TKQ2-1826-SM-33HB2 70.8
GTEX-R53T-1526-SM-48FEK 70.7
GTEX-ZVE2-1226-SM-5NQ8R 70.3
GTEX-WYVS-1726-SM-3NMAY 70.2
GTEX-11P81-1926-SM-5BC53 69.6
GTEX-U3ZH-1426-SM-4DXSR 69.4
GTEX-1313W-0826-SM-5EQ4T 69.2
GTEX-UPK5-2326-SM-3P5Z8 68.9
GTEX-ZDYS-1126-SM-5K7UB 68.6
GTEX-ZZ64-1226-SM-5E43R 67.9
GTEX-145LT-0726-SM-5S2VM 67.8
GTEX-11EI6-0626-SM-5985T 67.5
GTEX-139T8-0826-SM-5L3DE 67.4
GTEX-R55D-0826-SM-48FEA 67.4
GTEX-13O61-1826-SM-5KM4I 67.3
GTEX-14AS3-1626-SM-5S2OY 67.2
GTEX-XMD1-0826-SM-4AT52 66.8
GTEX-133LE-1726-SM-5K7VQ 66.4
GTEX-13N1W-0626-SM-5MR4U 66.3
GTEX-14753-2426-SM-5LU8U 66.0
GTEX-145MO-0826-SM-5NQBL 65.8
GTEX-145ME-1526-SM-5Q5F2 65.6
GTEX-13NZB-2126-SM-5MR4Y 65.5
GTEX-XMD2-0926-SM-4WWEF 65.4
GTEX-TML8-1226-SM-32QON 64.6
GTEX-Y114-2026-SM-4TT7L 64.4
GTEX-T5JC-2126-SM-32PMO 64.3
GTEX-ZV7C-1826-SM-5NQ83 64.2
GTEX-11O72-2126-SM-5N9FO 63.9
GTEX-T2IS-1526-SM-32QPR 63.7
GTEX-13FTW-1426-SM-5LZWZ 63.5
GTEX-QDT8-0626-SM-48TYW 63.2
GTEX-12WSN-1326-SM-5GCNT 63.0
GTEX-Y5V5-2126-SM-4WWFO 62.3
GTEX-S33H-0326-SM-4AD6N 62.1
GTEX-11EQ9-1826-SM-5Q5AJ 61.8
GTEX-1399U-1826-SM-5PNZ1 61.6
GTEX-13PL6-2926-SM-5L3I2 61.1
GTEX-11EMC-2026-SM-5A5JV 60.9
GTEX-13113-1726-SM-5GCOO 60.8
GTEX-Y9LG-1426-SM-5IFJZ 60.8
GTEX-XUZC-1626-SM-4BRVP 60.7
GTEX-ZV6S-1826-SM-5NQ8D 60.7
GTEX-ZYW4-0826-SM-5GIDG 60.7
GTEX-Y3IK-2326-SM-4WWDT 60.5
GTEX-ZAB4-2526-SM-5HL8M 60.3
GTEX-ZVTK-0326-SM-51MRR 60.2
GTEX-12WSM-1726-SM-5BC6J 60.0
GTEX-11I78-2226-SM-5PNYA 59.9
GTEX-YEC3-1026-SM-5IFI5 59.8
GTEX-RU72-0626-SM-46MUI 59.7
GTEX-YFC4-1426-SM-5IFJG 59.6
GTEX-11DXW-0626-SM-5N9ER 59.2
GTEX-ZWKS-2826-SM-5NQ74 59.2
GTEX-WYJK-1326-SM-3NB2T 58.7
GTEX-ZLV1-1426-SM-4WWES 58.5
GTEX-WXYG-2226-SM-4E3IM 58.4
GTEX-RWS6-1926-SM-47JXY 58.3
GTEX-S4P3-1326-SM-4AD6V 58.2
GTEX-11EM3-1326-SM-5N9C6 57.8
GTEX-Q2AG-0326-SM-48U1O 57.8
GTEX-13FTY-2226-SM-5J1ND 57.7
GTEX-ZQUD-1926-SM-51MSA 57.2
GTEX-XUW1-2326-SM-4BOO5 56.6
GTEX-ZYT6-0126-SM-5E45J 56.3
GTEX-13FHO-0826-SM-5L3E8 56.2
GTEX-14ABY-2126-SM-5QGQZ 55.7
GTEX-WYBS-0926-SM-3NM94 55.5
GTEX-11NSD-0926-SM-5N9DR 55.2
GTEX-XQ3S-1326-SM-4BOPQ 55.1
GTEX-13OW8-0226-SM-5K7UP 54.2
GTEX-WRHU-0326-SM-3MJFY 54.2
GTEX-YB5E-1726-SM-5IFJ3 53.9
GTEX-11P7K-0726-SM-5EGKX 53.3
GTEX-111YS-1926-SM-5GICC 53.2
GTEX-11GS4-2126-SM-5A5KR 53.2
GTEX-T6MN-0726-SM-32PML 53.1
GTEX-XUJ4-1926-SM-4BOOV 53.1
GTEX-139T6-1626-SM-5PNYZ 52.6
GTEX-ZDTT-2126-SM-5S2OJ 52.5
GTEX-11LCK-2426-SM-5HL5F 52.4
GTEX-145MN-1926-SM-5SIAI 52.2
GTEX-XBED-1626-SM-47JYN 52.2
GTEX-Y111-2026-SM-4SOJA 52.2
GTEX-1122O-1226-SM-5H113 51.8
GTEX-ZF2S-2026-SM-5E461 51.8
GTEX-YFCO-1826-SM-4W1YH 51.7
GTEX-13N11-1726-SM-5J1OJ 51.6
GTEX-UJHI-1426-SM-3DB9C 51.6
GTEX-WFON-1826-SM-3GILG 51.2
GTEX-Y3I4-1526-SM-4TT7K 51.1
GTEX-ZUA1-1526-SM-59HLS 50.7
GTEX-WI4N-1426-SM-3LK7H 50.5
GTEX-S7SE-0826-SM-4AT4D 50.4
GTEX-ZYFC-0826-SM-5E44K 50.4
GTEX-12BJ1-1826-SM-5HL9N 49.7
GTEX-1269C-2426-SM-5FQSN 49.6
GTEX-X15G-1626-SM-3NMB3 49.6
GTEX-11OF3-1926-SM-59889 49.4
GTEX-Y5LM-1726-SM-4VDSX 49.3
GTEX-131YS-0626-SM-5EGKL 49.1
GTEX-13D11-1026-SM-5IJFB 49.1
GTEX-U3ZN-1926-SM-4DXSG 49.1
GTEX-13QIC-2326-SM-5LU5N 49.0
GTEX-132Q8-1426-SM-5EGK7 48.8
GTEX-ZXES-0826-SM-5E43C 48.7
GTEX-ZVT2-1826-SM-5NQ8W 48.4
GTEX-11ONC-2126-SM-5HL6E 48.3
GTEX-QMRM-1626-SM-4R1KV 48.3
GTEX-12WSB-0626-SM-59HJO 48.1
GTEX-147F4-2826-SM-5NQBN 48.1
GTEX-XMK1-1126-SM-4IHJ8 47.2
GTEX-11ZUS-0826-SM-5FQUY 47.1
GTEX-SIU7-1626-SM-4BRUK 47.1
GTEX-13CF2-2026-SM-5K7VI 47.0
GTEX-Y8LW-1626-SM-5IFHX 46.9
GTEX-139TU-0626-SM-5KM3X 46.5
GTEX-S341-1526-SM-4AD6K 45.6
GTEX-11WQC-1726-SM-5GU4W 45.5
GTEX-XOT4-0726-SM-4GIAW 45.5
GTEX-ZZPU-0626-SM-5E43T 45.5
GTEX-ZF29-1926-SM-5S2P1 45.3
GTEX-QVJO-1826-SM-447C9 44.9
GTEX-ZF3C-2326-SM-5S2MZ 44.9
GTEX-11PRG-0826-SM-5EQ6A 44.4
GTEX-YJ8O-2226-SM-5IFHW 43.2
GTEX-144GL-2026-SM-5LU3O 43.1
GTEX-12WSK-2226-SM-5GCO5 43.0
GTEX-ZEX8-2226-SM-57WC6 43.0
GTEX-11DXY-2326-SM-5GICW 42.8
GTEX-11DXZ-1926-SM-5GZZL 42.4
GTEX-132NY-0826-SM-5K7Y7 41.5
GTEX-131XW-0726-SM-5EGK3 41.1
GTEX-11GSO-1926-SM-5A5K3 40.5
GTEX-11NV4-2026-SM-5N9DG 40.2
GTEX-ZVZQ-0826-SM-51MRF 38.2
GTEX-ZVT4-1026-SM-57WC4 35.3
GTEX-117XS-1926-SM-5GICO 27.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

238.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 238.0
FF:10080-102A8 77 years, female 238.0

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