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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:101.3TPM
GTEx:11.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA026281

 

Antibody HPA051783

 

Antibody HPA051785

 

Antibody HPA053973

 

Endothelial cells

Not detected   Not detected   Low   Not detected  

Glial cells

Medium   Low   Not detected   Low  

Neuronal cells

Medium   High   Medium   High  

Neuropil

Medium   High   Low   Medium  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

101.3

N/A Male, age 5
Sample 1
TPM: 83.7
overview Female, age 40
Sample 2
TPM: 65.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 155.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

11.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 8.8
Samples: 114

Max RPKM: 26.6
Min RPKM: 3.8
Std RPKM: 3.2
Median RPKM: 8.4
GTEX-11OF3-2926-SM-5HL78 26.6
GTEX-QMR6-1426-SM-32PLA 17.6
GTEX-PVOW-2526-SM-2XCF7 15.4
GTEX-UTHO-3026-SM-3GAFB 15.4
GTEX-13FHO-3026-SM-5J1O9 14.9
GTEX-13FXS-3126-SM-5J2NN 14.6
GTEX-TSE9-3026-SM-3DB76 14.0
GTEX-WZTO-2926-SM-3NM9I 13.6
GTEX-11DXY-3226-SM-5GIDE 13.4
GTEX-WHSE-3026-SM-3P5ZH 12.8
GTEX-WL46-2926-SM-3LK82 12.4
GTEX-QDT8-2926-SM-32PKC 12.0
GTEX-Z93S-2926-SM-57WB9 11.9
GTEX-11WQK-3026-SM-5EQL6 11.8
GTEX-13FLW-1426-SM-5K7YE 11.7
GTEX-YFC4-3126-SM-5PNV6 11.7
GTEX-14BMV-3026-SM-5S2PQ 11.6
GTEX-13NYS-3126-SM-5KLYV 11.5
GTEX-145LS-3126-SM-5Q5BY 11.4
GTEX-X585-3026-SM-46MWF 11.2
GTEX-T5JC-2426-SM-3NMDB 11.1
GTEX-XLM4-3026-SM-4AT6L 11.0
GTEX-WWYW-3126-SM-3NB39 10.9
GTEX-WVLH-3026-SM-3MJG9 10.8
GTEX-ZAK1-3026-SM-5S2MJ 10.8
GTEX-1313W-3126-SM-5LZUI 10.7
GTEX-132Q8-3026-SM-5PNVG 10.7
GTEX-13OVH-3026-SM-5MR4N 10.7
GTEX-T2IS-3026-SM-32QPM 10.7
GTEX-145MH-3026-SM-5Q5DZ 10.6
GTEX-Y8DK-0826-SM-4TT3T 10.6
GTEX-11NUK-2926-SM-5A5MD 10.1
GTEX-12ZZZ-3026-SM-5BC67 10.0
GTEX-14ASI-3026-SM-5S2PN 10.0
GTEX-11PRG-2926-SM-5987A 9.9
GTEX-12ZZX-2926-SM-5GCOQ 9.9
GTEX-13NYC-2826-SM-5K7WR 9.9
GTEX-13VXU-2926-SM-5LU5C 9.8
GTEX-T6MN-2626-SM-32PMQ 9.8
GTEX-11DXW-1126-SM-5H12Q 9.7
GTEX-11ZUS-2926-SM-5FQSL 9.7
GTEX-ZUA1-3026-SM-59HJC 9.7
GTEX-13OW6-3026-SM-5J2MI 9.6
GTEX-RNOR-2326-SM-2TF4I 9.6
GTEX-13X6J-3026-SM-5Q5CU 9.5
GTEX-ZVT3-3026-SM-5E43N 9.5
GTEX-XOTO-3026-SM-4B65M 9.4
GTEX-111FC-3126-SM-5GZZ2 9.2
GTEX-13FHP-3026-SM-5IJBS 9.2
GTEX-13SLX-3126-SM-5S2Q5 9.1
GTEX-X4XX-3026-SM-3NMB2 9.0
GTEX-13PL6-3126-SM-5LUAR 8.9
GTEX-QVUS-2826-SM-3GADB 8.9
GTEX-RU72-3026-SM-5SI7Y 8.7
GTEX-131YS-3126-SM-5KLYT 8.5
GTEX-1399T-3026-SM-5KLZC 8.5
GTEX-13O3O-3126-SM-5KM3H 8.4
GTEX-145MG-3026-SM-5RQJA 8.3
GTEX-13PVQ-3026-SM-5SI93 8.1
GTEX-ZYFD-3026-SM-5E44C 8.1
GTEX-12126-1026-SM-5P9JJ 7.9
GTEX-12ZZY-3026-SM-5GCOU 7.8
GTEX-144GL-3026-SM-5Q5CW 7.7
GTEX-1192X-3126-SM-5N9BY 7.6
GTEX-13OVJ-2826-SM-5L3GW 7.6
GTEX-145MF-2726-SM-5O995 7.6
GTEX-11O72-2926-SM-5BC4V 7.5
GTEX-R55F-1326-SM-5S2V4 7.5
GTEX-13QIC-2926-SM-5J2NF 7.3
GTEX-13O3Q-2926-SM-5KM45 7.2
GTEX-QVJO-1426-SM-2S1QY 7.2
GTEX-11ONC-2926-SM-5P9JM 7.1
GTEX-12WSC-3026-SM-5GCNF 7.1
GTEX-12WSH-3026-SM-5CVNI 7.1
GTEX-OXRN-2426-SM-2I5EQ 7.1
GTEX-YJ89-3026-SM-5IFJI 7.1
GTEX-13OW8-2826-SM-5L3GC 7.0
GTEX-144FL-3026-SM-5O99C 7.0
GTEX-14A5I-2926-SM-5Q5CQ 6.9
GTEX-1128S-2726-SM-5H12C 6.8
GTEX-13NYB-3026-SM-5IJD7 6.8
GTEX-NPJ8-1526-SM-2D7VU 6.8
GTEX-ZAJG-3126-SM-5HL9J 6.8
GTEX-139T8-1026-SM-5J2MC 6.7
GTEX-13X6K-2926-SM-5Q5D5 6.7
GTEX-Q2AG-2926-SM-2HMJ3 6.6
GTEX-11GSO-2926-SM-5HL73 6.5
GTEX-NPJ7-2726-SM-2I3FT 6.4
GTEX-13OW7-3026-SM-5L3GY 6.3
GTEX-13S7M-3126-SM-5RQJQ 6.3
GTEX-Y111-2726-SM-4TT3N 6.3
GTEX-11GS4-3126-SM-5A5LH 6.2
GTEX-13JVG-3126-SM-5L3FH 6.2
GTEX-11EI6-3026-SM-5GZZO 6.1
GTEX-117XS-3026-SM-5N9CA 6.0
GTEX-11OC5-0726-SM-5P9JK 6.0
GTEX-13IVO-2926-SM-5L3CZ 5.8
GTEX-ZE7O-3126-SM-5HL5X 5.8
GTEX-11TTK-2926-SM-5PNYP 5.7
GTEX-1117F-3226-SM-5N9CT 5.6
GTEX-N7MT-1126-SM-5SI7V 5.6
GTEX-11EMC-3226-SM-5EGKW 5.4
GTEX-11NV4-2126-SM-5N9DS 5.4
GTEX-ZZPT-3026-SM-5GZXH 5.4
GTEX-13G51-3026-SM-5IJB8 5.3
GTEX-13JUV-2926-SM-5LZX7 5.3
GTEX-12ZZW-2926-SM-5LZUP 5.0
GTEX-131XW-3126-SM-5LZUC 5.0
GTEX-147GR-3026-SM-5S2ML 5.0
GTEX-PWO3-0926-SM-2I5EY 5.0
GTEX-12WSD-3126-SM-5HL7P 4.9
GTEX-11GSP-3226-SM-5986O 4.3
GTEX-1445S-3026-SM-5O9BR 3.9
GTEX-12WSA-2926-SM-5EQ4D 3.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 13.8
Samples: 108

Max RPKM: 26
Min RPKM: 2.9
Std RPKM: 5.8
Median RPKM: 13.7
GTEX-QMR6-0011-R10A-SM-32PKO 26.0
GTEX-131XH-0011-R10a-SM-5EGLJ 25.6
GTEX-T6MN-0011-R10A-SM-32QP7 25.1
GTEX-QDT8-0011-R10A-SM-32PKG 24.8
GTEX-X4EP-0011-R10B-SM-4QASJ 24.7
GTEX-S7SE-0011-R10A-SM-2XCDF 24.4
GTEX-WVLH-0011-R10A-SM-3MJFM 24.3
GTEX-WWYW-0011-R10A-SM-3NB35 24.1
GTEX-12WSE-0011-R10b-SM-5P9JV 23.9
GTEX-X585-0011-R10A-SM-46MUY 23.6
GTEX-145MH-0011-R10b-SM-5PNUK 23.4
GTEX-YFC4-0011-R10a-SM-4SOK5 22.8
GTEX-Z93S-0011-R10a-SM-4RGNM 21.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 21.4
GTEX-WZTO-0011-R10B-SM-4E3KB 21.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 21.3
GTEX-WL46-0011-R10A-SM-3MJFQ 20.6
GTEX-NL3H-0011-R10A-SM-2I3E9 19.5
GTEX-13X6J-0011-R10b-SM-5PNWA 19.4
GTEX-13X6K-0011-R10a-SM-5P9JR 18.8
GTEX-1313W-0011-R10b-SM-5DUXA 18.6
GTEX-13QIC-0011-R10a-SM-5O9C7 18.3
GTEX-14BIN-0011-R10a-SM-5S2UA 18.3
GTEX-YJ89-0011-R10a-SM-4SOK9 18.1
GTEX-12ZZX-0011-R10b-SM-5DUWK 17.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 17.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 17.6
GTEX-QVUS-0011-R10A-SM-3GIK3 17.6
GTEX-145MG-0011-R10a-SM-5PNWG 17.5
GTEX-13X6I-0011-R10a-SM-5PNWI 17.1
GTEX-P44H-0011-R10A-SM-2XCEK 16.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 16.5
GTEX-N7MS-0011-R10A-SM-2HMJK 16.4
GTEX-13N1W-0011-R10b-SM-5MR4H 16.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 15.9
GTEX-13O3Q-0011-R10b-SM-5KM39 15.7
GTEX-11H98-0011-R10b-SM-5NQ98 15.6
GTEX-145LS-0011-R10a-SM-5PNUQ 15.6
GTEX-12WSM-0011-R10a-SM-5DUWV 15.4
GTEX-T5JC-0011-R10A-SM-32PM2 15.4
GTEX-12WSF-0011-R10a-SM-5LZVH 15.3
GTEX-13FHO-0011-R10b-SM-5J2MM 15.0
GTEX-13OVL-0011-R10a-SM-5L3GS 15.0
GTEX-12WSC-0011-R10a-SM-5GU57 14.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 14.9
GTEX-XLM4-0011-R10A-SM-4AT5P 14.8
GTEX-13S7M-0011-R10b-SM-5PNZB 14.7
GTEX-131YS-0011-R10b-SM-5EQ5N 14.5
GTEX-13CZV-0011-R10b-SM-5LZYD 14.4
GTEX-13FXS-0011-R10a-SM-5J2MA 14.4
GTEX-13SLX-0011-R10a-SM-5P9HV 14.4
GTEX-X4XX-0011-R10B-SM-46MWO 14.1
GTEX-NPJ8-0011-R10A-SM-2YUMO 13.9
GTEX-13FLW-0011-R10b-SM-5LZZF 13.7
GTEX-ZF28-0011-R10a-SM-4WWEH 13.7
GTEX-TSE9-0011-R10A-SM-3DB7O 13.6
GTEX-13O3O-0011-R10a-SM-5LUA9 13.5
GTEX-OXRN-0011-R10A-SM-2I5GC 13.5
GTEX-147GR-0011-R10b-SM-5S2UM 13.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 13.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 12.8
GTEX-11WQK-0011-R10a-SM-5BC6R 12.6
GTEX-ZUA1-0011-R10a-SM-51MT6 12.6
GTEX-13G51-0011-R10b-SM-5LZYF 12.5
GTEX-13NYB-0011-R10a-SM-5KM43 12.5
GTEX-13N2G-0011-R10a-SM-5MR34 12.2
GTEX-13NYS-0011-R10a-SM-5MR4S 12.1
GTEX-12WSH-0011-R10a-SM-5LZUS 12.0
GTEX-13QJC-0011-R10a-SM-5SI63 11.8
GTEX-N7MT-0011-R10A-SM-2I3E1 11.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 11.3
GTEX-ZDXO-0011-R10a-SM-4WWD8 11.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 11.0
GTEX-14BIL-0011-R10a-SM-5SI75 10.7
GTEX-147F4-0011-R10b-SM-5S2WC 10.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 10.3
GTEX-ZVT3-0011-R10b-SM-57WB6 10.3
GTEX-13OW6-0011-R10a-SM-5L3HE 9.9
GTEX-13OW8-0011-R10a-SM-5L3H6 9.9
GTEX-13JUV-0011-R10b-SM-5LZXR 9.7
GTEX-13OW7-0011-R10a-SM-5L3H3 9.6
GTEX-11ZUS-0011-R10b-SM-5BC79 9.3
GTEX-12126-0011-R10b-SM-5BC6T 9.2
GTEX-145LU-0011-R10a-SM-5PNWJ 9.2
GTEX-12WSD-0011-R10b-SM-5GU79 8.9
GTEX-X261-0011-R10B-SM-4E3JT 8.5
GTEX-RVPU-0011-R10A-SM-2XCAH 7.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 7.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 7.5
GTEX-ZXG5-0011-R10a-SM-57WDD 7.5
GTEX-13SLW-0011-R10a-SM-5S2UI 7.2
GTEX-NL4W-0011-R10A-SM-2I3DY 7.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 7.1
GTEX-OXRO-0011-R10A-SM-2I5EH 7.0
GTEX-XMD1-0011-R10A-SM-4AT4A 6.2
GTEX-139TS-0011-R10a-SM-5K7TU 5.9
GTEX-11WQC-0011-R10a-SM-57WCT 5.7
GTEX-13JVG-0011-R10b-SM-5KM2P 5.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 5.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 5.0
GTEX-13IVO-0011-R10a-SM-5LZY3 4.9
GTEX-13NZA-0011-R10b-SM-5KM54 4.7
GTEX-14753-0011-R10b-SM-5S2WE 4.7
GTEX-1445S-0011-R10a-SM-5PNWB 4.6
GTEX-12WSA-0011-R10b-SM-5P9ET 4.2
GTEX-ZV68-0011-R10a-SM-51MT7 3.5
GTEX-1477Z-0011-R10b-SM-5S2RF 3.4
GTEX-131XW-0011-R10a-SM-5DUVA 2.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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