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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:7.9RPKM
FANTOM5:140.2Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:High
 

Antibody staining

Antibody HPA026281

 

Antibody HPA051783

 

Antibody HPA051785

 

Antibody HPA053973

 

Glial cells

Low   Not detected   Not detected   Not detected  

Neuronal cells

Low   High   Medium   High  
       
       
       

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

7.9

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 7.9
Samples: 94

Max RPKM: 22.7
Min RPKM: 1.4
Std RPKM: 4.7
Median RPKM: 6.4
GTEX-QDT8-0011-R1A-SM-32PKS 22.7
GTEX-T6MN-0011-R1A-SM-32QOY 20.0
GTEX-WWYW-0011-R1A-SM-3TW8G 18.2
GTEX-131XH-0011-R1a-SM-5DUWA 17.7
GTEX-RNOR-0011-R1A-SM-5SI8F 17.3
GTEX-R55E-0011-R1A-SM-2TC6N 16.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 16.7
GTEX-13FLW-0011-R1b-SM-5LZX2 16.2
GTEX-WL46-0011-R1A-SM-3LK6M 16.1
GTEX-144GL-0011-R1a-SM-5PNZ5 16.0
GTEX-X585-0011-R1B-SM-46MVE 15.5
GTEX-1313W-0011-R1b-SM-5EQ4A 14.9
GTEX-12WSF-0011-R1a-SM-5DUVI 14.7
GTEX-QVJO-0011-R1A-SM-2S1QI 14.3
GTEX-PVOW-0011-R1A-SM-32PL6 14.1
GTEX-145MH-0011-R1b-SM-5PNWY 13.7
GTEX-XOTO-0011-R1B-SM-4B65C 12.4
GTEX-13FHO-0011-R1b-SM-5KLZG 11.9
GTEX-X4XX-0011-R1B-SM-3P622 11.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 11.2
GTEX-13N1W-0011-R1b-SM-5MR4T 11.1
GTEX-13JUV-0011-R1a-SM-5LZY4 11.0
GTEX-P44H-0011-R1A-SM-3NM8J 10.9
GTEX-QMR6-0011-R1A-SM-32PKW 10.6
GTEX-12WSE-0011-R1b-SM-5GU4V 10.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 10.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 9.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 9.0
GTEX-QVUS-0011-R1A-SM-3GAD2 8.8
GTEX-TSE9-0011-R1A-SM-3DB7E 8.8
GTEX-WZTO-0011-R1B-SM-3NMAR 8.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 8.6
GTEX-13NYS-0011-R1b-SM-5MR55 8.6
GTEX-13OW6-0011-R1a-SM-5L3HQ 8.5
GTEX-PWO3-0011-R1A-SM-2I5EW 8.3
GTEX-13NYB-0011-R1b-SM-5KM4F 8.1
GTEX-12WSH-0011-R1a-SM-5GU5V 8.0
GTEX-UTHO-0011-R1A-SM-3GIJO 7.6
GTEX-T5JC-0011-R1A-SM-32PM6 7.3
GTEX-YFC4-0011-R1a-SM-4V6EH 7.2
GTEX-13FXS-0011-R1a-SM-5K7U6 7.1
GTEX-N7MT-0011-R1a-SM-5SI7S 6.9
GTEX-145LS-0011-R1b-SM-5PNUP 6.9
GTEX-N7MS-0011-R1a-SM-2HMJG 6.8
GTEX-14ASI-0011-R1b-SM-5S2TY 6.8
GTEX-NPJ7-0011-R1a-SM-3GACT 6.7
GTEX-NL3H-0011-R1a-SM-48TDJ 6.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 6.3
GTEX-13N2G-0011-R1b-SM-5MR3G 6.2
GTEX-13O3O-0011-R1b-SM-5KM2K 6.1
GTEX-13X6I-0011-R1b-SM-5PNZC 6.1
GTEX-13OW5-0011-R1b-SM-5L3GE 6.1
GTEX-13G51-0011-R1a-SM-5LZYR 6.1
GTEX-12WSD-0011-R1b-SM-5LZVY 6.0
GTEX-NPJ8-0011-R1a-SM-33HCB 5.9
GTEX-S7SE-0011-R1A-SM-2XCDE 5.9
GTEX-11UD1-0011-R1b-SM-5BC7D 5.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 5.6
GTEX-139TT-0011-R1a-SM-5LZVD 5.3
GTEX-131YS-0011-R1a-SM-5DUXC 5.2
GTEX-XMD1-0011-R1A-SM-4AT4C 5.0
GTEX-132Q8-0011-R1a-SM-5EGLK 5.0
GTEX-1399T-0011-R1b-SM-5DUWN 4.9
GTEX-12WSM-0011-R1a-SM-5LZW6 4.9
GTEX-WVLH-0011-R1A-SM-4MVOK 4.7
GTEX-ZF28-0011-R1a-SM-4WWD1 4.7
GTEX-13S7M-0011-R1b-SM-5PNZE 4.6
GTEX-13PDP-0011-R1a-SM-5PNX5 4.6
GTEX-13OW7-0011-R1b-SM-5L3HF 4.6
GTEX-11GSO-0011-R1b-SM-57WD3 4.3
GTEX-139T8-0011-R1a-SM-5HL75 4.3
GTEX-1212Z-0011-R1b-SM-5BC72 4.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 4.1
GTEX-13QJC-0011-R1b-SM-5S2UU 4.0
GTEX-13OW8-0011-R1a-SM-5L3HI 3.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 3.9
GTEX-13SLW-0011-R1a-SM-5S2W7 3.9
GTEX-13112-0011-R1b-SM-5HL7K 3.8
GTEX-11ZTS-0011-R1a-SM-5BC71 3.8
GTEX-YJ89-0011-R1a-SM-4RGLS 3.8
GTEX-11ONC-0011-R1a-SM-57WD4 3.7
GTEX-13OVL-0011-R1a-SM-5L3H5 3.6
GTEX-13JVG-0011-R1a-SM-5KM32 3.5
GTEX-13FHP-0011-R1b-SM-5K7XL 3.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 3.2
GTEX-ZVZQ-0011-R1a-SM-57WBU 3.1
GTEX-145LU-0011-R1a-SM-5Q5CE 3.0
GTEX-13NZA-0011-R1b-SM-5LUAF 3.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 2.8
GTEX-13CF2-0011-R1a-SM-5LZY1 2.5
GTEX-ZE7O-0011-R1a-SM-57WDM 2.3
GTEX-12WSB-0011-R1b-SM-5P9EY 2.3
GTEX-144GO-0011-R1a-SM-5PNWO 2.1
GTEX-13FTY-0011-R1a-SM-5LZXE 1.4
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

140.2

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 140.2
FF:10169-103B7 60 years, female 158.0
FF:10153-102I9 76 years, female 156.1
FF:10374-105G5 89 years, female 106.5

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by the Knut & Alice Wallenberg foundation.