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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA ENDOMETRIUM

GENE/PROTEIN

Antibody validation


Dictionary

Endometrium

Tissue proteome

Endometrium

ENDOMETRIUM - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:78.7TPM
GTEx:23.7RPKM
FANTOM5:94.5Tags Per Million

ENDOMETRIUM 1 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:High
Glandular cells:Not detected
 

Antibody staining

Antibody HPA027524

 

Antibody CAB058686

 

Cells in endometrial stroma

High   High  

Glandular cells

Not detected   Not detected  
   
   
   

ENDOMETRIUM 2 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:High
Glandular cells:Not detected
 

Antibody staining

Antibody HPA027524

 

Antibody CAB058686

 

Cells in endometrial stroma

Medium   High  

Glandular cells

Not detected   Not detected  
   
   
   

ENDOMETRIUM - HPA RNA-seq

Average TPM

78.7

overview Female, age 34
Sample 1
TPM: 68.9
Cell types%
Glandular cells: 5
Stromal cells: 25
Smooth muscle cells: 65
Other cell types: 5
overview Female, age 56
Sample 2
TPM: 74.8
Cell types%
Glandular cells: 5
Stromal cells: 15
Smooth muscle cells: 75
Other cell types: 5
overview Female, age 40
Sample 3
TPM: 59.2
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 70
Other cell types: 5
overview Female, age 60
Sample 4
TPM: 82.0
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 75
Other cell types: 0
overview Female, age 83
Sample 5
TPM: 108.7
Cell types%
Glandular cells: 5
Stromal cells: 10
Smooth muscle cells: 80
Other cell types: 5

ENDOMETRIUM - GTEx RNA-seq

Average RPKM

23.7

GTEx sample id

RPKM

21.424.026.816.829.20246810121416182022242628
 
21.424.026.816.829.20246810121416182022242628

Uterus - Endometrium

Uterus - Endometrium
RPKM: 23.7
Samples: 14

Max RPKM: 29.2
Min RPKM: 16.8
Std RPKM: 3.7
Median RPKM: 24
GTEX-PWN1-2026-SM-48TD9 29.2
GTEX-T6MO-1526-SM-4DM57 28.9
GTEX-U3ZN-0726-SM-4DXT5 28.4
GTEX-13QBU-1626-SM-5LU4S 27.2
GTEX-11EM3-1926-SM-5987U 25.4
GTEX-T5JW-1526-SM-4DM5E 25.1
GTEX-Y114-1826-SM-4TT87 24.6
GTEX-PX3G-2026-SM-48U1H 23.3
GTEX-ZVT2-0426-SM-5E44S 21.9
GTEX-R55G-1626-SM-48FF4 21.6
GTEX-XUZC-0926-SM-4BOQF 21.4
GTEX-ZTPG-2026-SM-5O999 20.2
GTEX-P78B-2526-SM-3P5ZY 18.2
GTEX-S32W-1426-SM-4AD66 16.8
Show all

ENDOMETRIUM - FANTOM5 CAGE

Average Tags Per Million

94.5

FANTOM5 sample id

Sample description

Tags Per Million

Uterus
Tags Per Million: 94.5
FF:10100-102D1 23-63 years, female 94.5

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