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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:8.7RPKM
FANTOM5:47.5Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Low
 

Antibody staining

Antibody HPA027524

 

Antibody CAB058686

 

Glial cells

High   Medium  

Neuronal cells

Medium   Low  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

8.7

GTEx sample id

RPKM

6.88.310.04.114.1024681012141618
 
6.88.310.04.114.1024681012141618

Brain - Hippocampus

Brain - Hippocampus
RPKM: 8.7
Samples: 94

Max RPKM: 18.9
Min RPKM: 4.1
Std RPKM: 2.6
Median RPKM: 8.3
GTEX-11ZTS-0011-R1a-SM-5BC71 18.9
GTEX-R55E-0011-R1A-SM-2TC6N 15.5
GTEX-QVUS-0011-R1A-SM-3GAD2 14.9
GTEX-QVJO-0011-R1A-SM-2S1QI 14.1
GTEX-1212Z-0011-R1b-SM-5BC72 14.0
GTEX-145LS-0011-R1b-SM-5PNUP 14.0
GTEX-PWO3-0011-R1A-SM-2I5EW 13.9
GTEX-13OW8-0011-R1a-SM-5L3HI 12.7
GTEX-NPJ8-0011-R1a-SM-33HCB 12.3
GTEX-QDT8-0011-R1A-SM-32PKS 12.0
GTEX-ZUA1-0011-R1a-SM-4YCE2 11.9
GTEX-UTHO-0011-R1A-SM-3GIJO 11.8
GTEX-11UD1-0011-R1b-SM-5BC7D 11.6
GTEX-13JVG-0011-R1a-SM-5KM32 11.6
GTEX-11GSO-0011-R1b-SM-57WD3 11.4
GTEX-131YS-0011-R1a-SM-5DUXC 11.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 11.3
GTEX-14ASI-0011-R1b-SM-5S2TY 11.2
GTEX-XMD1-0011-R1A-SM-4AT4C 10.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 10.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 10.4
GTEX-145MH-0011-R1b-SM-5PNWY 10.2
GTEX-X4XX-0011-R1B-SM-3P622 10.2
GTEX-132Q8-0011-R1a-SM-5EGLK 10.0
GTEX-13FHO-0011-R1b-SM-5KLZG 9.9
GTEX-NPJ7-0011-R1a-SM-3GACT 9.8
GTEX-RNOR-0011-R1A-SM-5SI8F 9.8
GTEX-12WSD-0011-R1b-SM-5LZVY 9.8
GTEX-S7SE-0011-R1A-SM-2XCDE 9.7
GTEX-13NYS-0011-R1b-SM-5MR55 9.6
GTEX-YJ89-0011-R1a-SM-4RGLS 9.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 9.2
GTEX-13NZA-0011-R1b-SM-5LUAF 9.2
GTEX-WWYW-0011-R1A-SM-3TW8G 9.0
GTEX-13X6I-0011-R1b-SM-5PNZC 8.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 8.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 8.8
GTEX-ZVZQ-0011-R1a-SM-57WBU 8.7
GTEX-144GO-0011-R1a-SM-5PNWO 8.7
GTEX-XOTO-0011-R1B-SM-4B65C 8.6
GTEX-PVOW-0011-R1A-SM-32PL6 8.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 8.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 8.5
GTEX-T5JC-0011-R1A-SM-32PM6 8.5
GTEX-13OW5-0011-R1b-SM-5L3GE 8.4
GTEX-WZTO-0011-R1B-SM-3NMAR 8.3
GTEX-WL46-0011-R1A-SM-3LK6M 8.3
GTEX-13CF2-0011-R1a-SM-5LZY1 8.3
GTEX-N7MT-0011-R1a-SM-5SI7S 8.2
GTEX-T6MN-0011-R1A-SM-32QOY 8.1
GTEX-1313W-0011-R1b-SM-5EQ4A 8.1
GTEX-12WSH-0011-R1a-SM-5GU5V 8.0
GTEX-13FLW-0011-R1b-SM-5LZX2 8.0
GTEX-13G51-0011-R1a-SM-5LZYR 8.0
GTEX-13OVL-0011-R1a-SM-5L3H5 7.9
GTEX-13QJC-0011-R1b-SM-5S2UU 7.9
GTEX-13JUV-0011-R1a-SM-5LZY4 7.8
GTEX-13S7M-0011-R1b-SM-5PNZE 7.8
GTEX-QMR6-0011-R1A-SM-32PKW 7.6
GTEX-13NYB-0011-R1b-SM-5KM4F 7.5
GTEX-11ONC-0011-R1a-SM-57WD4 7.5
GTEX-TSE9-0011-R1A-SM-3DB7E 7.5
GTEX-WVLH-0011-R1A-SM-4MVOK 7.4
GTEX-13SLW-0011-R1a-SM-5S2W7 7.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 7.2
GTEX-13N2G-0011-R1b-SM-5MR3G 7.1
GTEX-131XH-0011-R1a-SM-5DUWA 7.0
GTEX-13OW7-0011-R1b-SM-5L3HF 6.9
GTEX-144GL-0011-R1a-SM-5PNZ5 6.8
GTEX-12WSF-0011-R1a-SM-5DUVI 6.8
GTEX-NL3H-0011-R1a-SM-48TDJ 6.8
GTEX-13N1W-0011-R1b-SM-5MR4T 6.8
GTEX-145LU-0011-R1a-SM-5Q5CE 6.7
GTEX-ZF28-0011-R1a-SM-4WWD1 6.6
GTEX-YFC4-0011-R1a-SM-4V6EH 6.5
GTEX-13112-0011-R1b-SM-5HL7K 6.4
GTEX-12WSE-0011-R1b-SM-5GU4V 6.4
GTEX-N7MS-0011-R1a-SM-2HMJG 6.3
GTEX-P44H-0011-R1A-SM-3NM8J 6.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 6.0
GTEX-13FHP-0011-R1b-SM-5K7XL 6.0
GTEX-1399T-0011-R1b-SM-5DUWN 5.9
GTEX-139TT-0011-R1a-SM-5LZVD 5.8
GTEX-X585-0011-R1B-SM-46MVE 5.8
GTEX-ZE7O-0011-R1a-SM-57WDM 5.7
GTEX-13PDP-0011-R1a-SM-5PNX5 5.7
GTEX-12WSB-0011-R1b-SM-5P9EY 5.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 5.5
GTEX-139T8-0011-R1a-SM-5HL75 5.5
GTEX-12WSM-0011-R1a-SM-5LZW6 5.3
GTEX-13FTY-0011-R1a-SM-5LZXE 5.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 5.1
GTEX-13FXS-0011-R1a-SM-5K7U6 4.1
GTEX-13O3O-0011-R1b-SM-5KM2K 4.1
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

47.5

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 47.5
FF:10153-102I9 76 years, female 67.3
FF:10169-103B7 60 years, female 43.5
FF:10374-105G5 89 years, female 31.8

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