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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.5TPM
GTEx:3.8RPKM
FANTOM5:23.5Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:High
Cells in tubules:Not detected
 

Antibody staining

Antibody HPA027524

 

Antibody CAB058686

 

Cells in glomeruli

High   High  

Cells in tubules

Low   Not detected  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

8.5

overview Female, age 58
Sample 1
TPM: 8.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 6.6
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 8.2
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 6.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 8.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 11.3
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 3.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 13.2
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 10.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

3.8

GTEx sample id

RPKM

2.53.44.71.27.70123456789
 
2.53.44.71.27.70123456789

Kidney - Cortex

Kidney - Cortex
RPKM: 3.8
Samples: 32

Max RPKM: 9.7
Min RPKM: 1.2
Std RPKM: 2
Median RPKM: 3.4
GTEX-11TTK-1926-SM-5PNW8 9.7
GTEX-RN64-1626-SM-48FD7 8.5
GTEX-13OVI-1126-SM-5KLZF 7.7
GTEX-147F4-2626-SM-5Q5CS 6.0
GTEX-1399S-0526-SM-5IJG8 5.5
GTEX-13OVL-1826-SM-5KLZR 5.4
GTEX-12696-0926-SM-5FQTV 4.9
GTEX-11GS4-2326-SM-5A5KS 4.8
GTEX-13112-2126-SM-5GCO4 4.7
GTEX-ZLFU-0926-SM-5P9F8 4.5
GTEX-13OW6-1826-SM-5N9F9 3.9
GTEX-13O1R-2526-SM-5N9FW 3.9
GTEX-UPIC-1126-SM-4IHLO 3.7
GTEX-ZYFG-1626-SM-5GZYY 3.6
GTEX-QLQW-1626-SM-4R1K1 3.5
GTEX-XPVG-0526-SM-4B65N 3.5
GTEX-ZYT6-2226-SM-5GIC9 3.3
GTEX-ZVZP-0926-SM-5GIDB 3.2
GTEX-T5JC-1526-SM-4DM68 3.1
GTEX-1497J-0826-SM-5NQAJ 2.8
GTEX-145MN-0326-SM-5QGQI 2.8
GTEX-ZYFD-1526-SM-5NQ7T 2.7
GTEX-12WSG-0826-SM-5EQ5A 2.6
GTEX-13RTJ-2226-SM-5S2Q1 2.6
GTEX-NPJ8-2226-SM-3TW8D 2.3
GTEX-ZC5H-1726-SM-5HL7X 2.2
GTEX-13NYB-1726-SM-5N9G2 2.1
GTEX-11OF3-1326-SM-5N9FJ 1.7
GTEX-P4QS-1126-SM-3NMD5 1.6
GTEX-Y5V6-2026-SM-5IFHO 1.3
GTEX-QDVN-1626-SM-48TZC 1.2
GTEX-N7MS-1626-SM-3LK5F 1.2
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

23.5

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 23.5
FF:10017-101C8 60,62,63 years, female 23.5

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