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SETBP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3.6TPM
GTEx:5.2RPKM
FANTOM5:21.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 
 

Antibody staining

Antibody HPA049022

  

Antibody HPA057259

  

Endothelial cells

 Not detected   Low  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Not detected  
      
   
   
   

COLON - HPA RNA-seq

Average TPM

3.6
overview Male, age 54
Sample 1
TPM: 3.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 3.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 1.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 3.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 3.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 5.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 3.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 2.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 6.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 2.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 3.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 5.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 2.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.2

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 7.0
Samples: 149

Max RPKM: 13.7
Min RPKM: 2.3
Std RPKM: 2.2
Median RPKM: 6.6
GTEX-ZZ64-0826-SM-5E449 13.7
GTEX-11DXX-1926-SM-5EGJK 13.4
GTEX-111YS-1826-SM-5GIEP 12.3
GTEX-139T6-1426-SM-5P9J7 12.2
GTEX-13O61-1526-SM-5KM3P 12.0
GTEX-XUZC-1526-SM-4BRV4 12.0
GTEX-Y114-1626-SM-4TT7I 11.9
GTEX-11I78-1326-SM-5PNY9 11.7
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 3.8
Samples: 196

Max RPKM: 13.9
Min RPKM: 0.4
Std RPKM: 3
Median RPKM: 2.9
GTEX-Y114-1526-SM-4TT79 13.9
GTEX-ZV6S-1226-SM-59HLH 13.7
GTEX-T6MO-0826-SM-4DM51 12.3
GTEX-111YS-1626-SM-5GZZ9 11.6
GTEX-12WSL-1626-SM-5GCMU 10.9
GTEX-ZYFG-1926-SM-5GID5 10.4
GTEX-TKQ1-0626-SM-4DXTS 10.3
GTEX-11P81-1126-SM-5GU5G 10.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

21.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 21.1
FF:10014-101C5 62,83,84 years, mixed 21.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.