We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CXADR
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:15.5TPM
GTEx:7.4RPKM
FANTOM5:18.6Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Low
 

Antibody staining

Antibody HPA003342

 

Antibody HPA030411

 

Antibody HPA030412

 

Antibody CAB005103

 

Squamous epithelial cells

Not detected   Medium   Medium   Low  
       
       
       

ESOPHAGUS - HPA RNA-seq

Average TPM

15.5

overview Female, age 70
Sample 1
TPM: 14.8
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 14.6
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 17.1
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

7.4

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 7.4
Samples: 286

Max RPKM: 18.5
Min RPKM: 2.9
Std RPKM: 2.9
Median RPKM: 6.8
GTEX-Y8E4-1726-SM-5LU9G 18.5
GTEX-144GM-1426-SM-5LU31 18.4
GTEX-U8XE-1726-SM-4E3IF 17.4
GTEX-145ME-0526-SM-5QGQV 17.2
GTEX-11LCK-1726-SM-5S2OQ 15.6
GTEX-XK95-1026-SM-4GIDV 15.4
GTEX-ZA64-0626-SM-5HL9O 15.3
GTEX-U3ZN-1726-SM-4DXUQ 14.2
GTEX-ZF3C-1626-SM-4WWB4 14.1
GTEX-ZT9X-0526-SM-5GCOP 13.7
GTEX-ZVE2-1326-SM-5NQ94 13.7
GTEX-UJHI-0826-SM-4IHLM 13.5
GTEX-13CF3-1626-SM-5IFG9 13.1
GTEX-13111-0826-SM-5LZV3 13.0
GTEX-145MN-1026-SM-5NQ9G 12.9
GTEX-X15G-0826-SM-4PQZD 12.9
GTEX-ZAB5-0926-SM-5CVMV 12.9
GTEX-144GN-0626-SM-5O9B2 12.7
GTEX-145MF-1426-SM-5O9B6 12.7
GTEX-14C38-2126-SM-5RQJO 12.3
GTEX-12ZZW-1726-SM-5DUVD 12.2
GTEX-13FHO-1726-SM-5IFGM 12.1
GTEX-131XE-1426-SM-5HL7V 11.9
GTEX-RU72-0726-SM-46MUW 11.7
GTEX-131XF-0826-SM-5GICG 11.6
GTEX-145LS-1826-SM-5LUAZ 11.6
GTEX-12KS4-0926-SM-5BC5S 11.5
GTEX-ZYY3-1526-SM-5SIA9 11.3
GTEX-NPJ8-1926-SM-3MJGB 11.2
GTEX-P78B-1026-SM-3NMC4 11.2
GTEX-WFJO-0826-SM-4LVM5 11.2
GTEX-PLZ5-0926-SM-3TW8L 11.1
GTEX-S33H-0826-SM-4AD5Y 11.0
GTEX-13U4I-1126-SM-5LU3S 10.9
GTEX-XXEK-0326-SM-4BRVV 10.9
GTEX-13O21-0626-SM-5IJDI 10.8
GTEX-RNOR-1226-SM-48FDQ 10.8
GTEX-V1D1-1026-SM-4JBHE 10.8
GTEX-13OVJ-1226-SM-5L3HA 10.7
GTEX-13X6I-1026-SM-5LU4C 10.7
GTEX-11EMC-2226-SM-5A5JW 10.5
GTEX-13O1R-1326-SM-5IJF5 10.2
GTEX-XGQ4-1526-SM-4AT6H 10.2
GTEX-139UW-1126-SM-5IJEJ 10.0
GTEX-139YR-1726-SM-5IFFK 10.0
GTEX-ZAB4-1126-SM-5HL86 10.0
GTEX-13PVQ-1726-SM-5IFF3 9.9
GTEX-146FQ-1026-SM-5LU8I 9.9
GTEX-11DXX-1126-SM-5GZZK 9.8
GTEX-13W46-1926-SM-5J2MF 9.8
GTEX-OIZI-1426-SM-3NB1T 9.8
GTEX-ZC5H-1326-SM-5HL7E 9.8
GTEX-139TU-1226-SM-5J2NL 9.7
GTEX-12WSD-1826-SM-5GCOA 9.6
GTEX-1399U-1026-SM-5J1OC 9.6
GTEX-QEL4-1426-SM-447AC 9.6
GTEX-WFG8-1226-SM-4V6EI 9.5
GTEX-Y5V5-1626-SM-4VDSG 9.5
GTEX-QESD-0826-SM-47J4G 9.4
GTEX-V955-1126-SM-4JBH3 9.4
GTEX-ZDYS-0826-SM-4WWCR 9.4
GTEX-OXRK-1326-SM-3NB1A 9.3
GTEX-P4QS-0626-SM-3NMD1 9.3
GTEX-Y8LW-0726-SM-5IFI1 9.3
GTEX-NFK9-1126-SM-3LK78 9.2
GTEX-O5YV-1026-SM-3LK72 9.2
GTEX-TMMY-1126-SM-4DXSX 9.2
GTEX-14E6E-0726-SM-5S2R3 9.1
GTEX-11DYG-1326-SM-5N9DO 9.0
GTEX-1497J-2726-SM-5SI9W 9.0
GTEX-S32W-0926-SM-4AD5X 9.0
GTEX-VJYA-0726-SM-4KL1T 9.0
GTEX-11TUW-1326-SM-5EQKV 8.9
GTEX-13X6H-1326-SM-5LU42 8.8
GTEX-144FL-2726-SM-5O98Z 8.8
GTEX-WFG7-1126-SM-4LMK3 8.8
GTEX-Y111-1626-SM-57WCY 8.8
GTEX-11DZ1-2026-SM-5A5KG 8.7
GTEX-Y114-0926-SM-4TT7J 8.7
GTEX-ZGAY-1126-SM-4WWBS 8.7
GTEX-N7MT-0326-SM-48TDP 8.6
GTEX-QV44-1126-SM-4R1KO 8.6
GTEX-VUSG-1226-SM-4KKZF 8.6
GTEX-QLQW-0526-SM-4R1KS 8.5
GTEX-YECK-1626-SM-5IFHQ 8.5
GTEX-11EM3-0826-SM-5N9CC 8.4
GTEX-1212Z-2126-SM-5FQTM 8.4
GTEX-133LE-0626-SM-5IFFJ 8.4
GTEX-Y3IK-1126-SM-51MSV 8.4
GTEX-Y5V6-1026-SM-4VBS2 8.4
GTEX-T5JC-1726-SM-4DM6U 8.3
GTEX-111YS-0926-SM-5EGGI 8.2
GTEX-12WSL-1526-SM-5GCP8 8.2
GTEX-XLM4-2326-SM-4TT2D 8.2
GTEX-ZF2S-1226-SM-4WWAX 8.2
GTEX-ZYFG-1126-SM-5GICY 8.2
GTEX-11NSD-1126-SM-5N9BQ 8.1
GTEX-11ONC-1526-SM-5GU6S 8.1
GTEX-13X6K-2126-SM-5O9D4 8.0
GTEX-OXRL-0626-SM-3NM9C 8.0
GTEX-PSDG-1326-SM-48TD2 8.0
GTEX-WVLH-1426-SM-4MVNX 8.0
GTEX-XV7Q-1126-SM-4BRVS 8.0
GTEX-ZTX8-0226-SM-5E44D 8.0
GTEX-11P7K-1326-SM-5BC5G 7.9
GTEX-OOBK-0625-SM-3LK5P 7.9
GTEX-13OVG-0626-SM-5IFEP 7.8
GTEX-QDVJ-0726-SM-48U1W 7.8
GTEX-139T6-0626-SM-5IFF9 7.7
GTEX-13FH7-0526-SM-5IJF8 7.7
GTEX-146FH-1726-SM-5QGQ2 7.7
GTEX-146FR-0426-SM-5SI97 7.7
GTEX-YFC4-1226-SM-5LU9R 7.7
GTEX-1211K-0926-SM-5FQTL 7.6
GTEX-PLZ4-1626-SM-3P618 7.6
GTEX-QEG5-1426-SM-447AS 7.6
GTEX-TSE9-1226-SM-4DXTM 7.6
GTEX-YF7O-0926-SM-5IFIF 7.6
GTEX-132AR-2226-SM-5J2NT 7.5
GTEX-ZUA1-1226-SM-5NQ6O 7.5
GTEX-132Q8-1826-SM-5EGIY 7.4
GTEX-QCQG-0626-SM-48U21 7.4
GTEX-Y3I4-1226-SM-4TT8N 7.4
GTEX-ZPU1-1426-SM-4WWFU 7.4
GTEX-11P82-0526-SM-5986P 7.3
GTEX-1399Q-1126-SM-5P9JA 7.3
GTEX-X4XY-1726-SM-46MVO 7.2
GTEX-13D11-1926-SM-5IFGB 7.1
GTEX-S3XE-0926-SM-4AD4S 7.1
GTEX-U3ZH-1026-SM-4DXUZ 7.1
GTEX-X4EO-1226-SM-4QARR 7.1
GTEX-XUJ4-1026-SM-4BOPB 7.1
GTEX-YEC3-2526-SM-4YCDN 7.1
GTEX-13NZB-1226-SM-5J2MW 7.0
GTEX-13OVI-2626-SM-5KM4T 7.0
GTEX-13S86-0826-SM-5SI6J 7.0
GTEX-R55E-1326-SM-48FCR 7.0
GTEX-X3Y1-1326-SM-4PQZB 7.0
GTEX-11XUK-0826-SM-5GU6P 6.9
GTEX-S7SF-0926-SM-4AD4M 6.9
GTEX-QDVN-1026-SM-48TZA 6.8
GTEX-R3RS-1326-SM-48FE7 6.8
GTEX-SNMC-0526-SM-4DM69 6.8
GTEX-WK11-1026-SM-4OOS8 6.8
GTEX-12ZZY-1426-SM-5N9EI 6.7
GTEX-WOFM-0626-SM-4OOS3 6.7
GTEX-R53T-1126-SM-48FD4 6.6
GTEX-RN64-1026-SM-48FDX 6.6
GTEX-S341-0526-SM-4AD5U 6.6
GTEX-SUCS-0726-SM-4DM7J 6.6
GTEX-UPIC-1026-SM-4IHLT 6.6
GTEX-XMD2-1326-SM-4YCET 6.6
GTEX-ZZPT-1426-SM-5N9C5 6.6
GTEX-12C56-1226-SM-5FQSU 6.5
GTEX-145LT-1126-SM-5LUA1 6.5
GTEX-14BMU-0926-SM-5S2QB 6.5
GTEX-Q2AH-0826-SM-48TZN 6.5
GTEX-T2IS-0826-SM-4DM6L 6.5
GTEX-11ZTS-2626-SM-5EGIC 6.4
GTEX-PVOW-1626-SM-48TC9 6.4
GTEX-Y5LM-1026-SM-4VDSQ 6.4
GTEX-ZTPG-1626-SM-5DUX2 6.4
GTEX-ZVT2-1326-SM-5E45H 6.4
GTEX-11P81-0826-SM-5P9GR 6.3
GTEX-R55D-1126-SM-48FEB 6.3
GTEX-RU1J-0326-SM-46MUM 6.3
GTEX-S4Q7-0626-SM-4AD5M 6.3
GTEX-ZYT6-1126-SM-5GZYR 6.3
GTEX-QLQ7-0926-SM-447BC 6.2
GTEX-R55G-1026-SM-48FDI 6.2
GTEX-UPK5-1226-SM-4IHL8 6.2
GTEX-11NUK-1326-SM-5P9GN 6.1
GTEX-13G51-0926-SM-5IFFU 6.1
GTEX-P4PQ-0626-SM-3NMCU 6.1
GTEX-SNOS-0626-SM-4DM5F 6.1
GTEX-XYKS-1526-SM-4BRUP 6.1
GTEX-13RTK-0526-SM-5S2QF 6.0
GTEX-OIZH-0626-SM-3NB1L 6.0
GTEX-YJ89-1526-SM-5P9IR 6.0
GTEX-11VI4-0526-SM-5EQ48 5.9
GTEX-13O3Q-0826-SM-5IFGF 5.9
GTEX-14BIN-2726-SM-5RQIE 5.9
GTEX-RWS6-0826-SM-47JXF 5.9
GTEX-145MO-1426-SM-5Q5BS 5.8
GTEX-TML8-1526-SM-4DXUX 5.8
GTEX-11DXZ-1226-SM-5H11L 5.7
GTEX-11EQ9-0726-SM-5A5K2 5.7
GTEX-13FTW-1626-SM-5KM4N 5.7
GTEX-145LV-1326-SM-5S2QI 5.7
GTEX-14E1K-1226-SM-5S2PD 5.7
GTEX-RTLS-1126-SM-46MUQ 5.7
GTEX-XMK1-1326-SM-4B65Q 5.7
GTEX-11TT1-0526-SM-5P9JO 5.6
GTEX-13W3W-1626-SM-5LU35 5.6
GTEX-QVUS-0626-SM-447CC 5.6
GTEX-RM2N-0726-SM-48FD5 5.6
GTEX-Y9LG-0626-SM-4WWDH 5.6
GTEX-ZYWO-1026-SM-5E45U 5.6
GTEX-12696-1326-SM-5FQTJ 5.5
GTEX-14ICL-0526-SM-5RQJ6 5.5
GTEX-ZXES-1126-SM-5GZXN 5.5
GTEX-12WSK-1126-SM-5LZV8 5.4
GTEX-144GO-2726-SM-5O9A2 5.4
GTEX-SE5C-1226-SM-4BRWV 5.4
GTEX-WRHK-0526-SM-4MVOF 5.4
GTEX-X585-1226-SM-46MW7 5.4
GTEX-XBED-1026-SM-48TCB 5.4
GTEX-12WSA-1426-SM-5EGJU 5.3
GTEX-OIZG-1026-SM-3LK5X 5.3
GTEX-Q2AI-0626-SM-48TZU 5.3
GTEX-R45C-1226-SM-48FEE 5.3
GTEX-RUSQ-0826-SM-47JWW 5.3
GTEX-RVPV-0526-SM-47JYL 5.3
GTEX-X62O-2226-SM-46MW3 5.3
GTEX-ZQUD-0426-SM-57WFR 5.3
GTEX-ZY6K-0626-SM-59HJL 5.3
GTEX-11ZU8-1526-SM-5EGHX 5.2
GTEX-13OW8-2326-SM-5L3I9 5.2
GTEX-14DAQ-1426-SM-5RQJD 5.2
GTEX-WFON-0826-SM-4LVMI 5.2
GTEX-11DXY-1426-SM-5N9CN 5.1
GTEX-131XG-1026-SM-5GCMX 5.1
GTEX-14AS3-0626-SM-5QGQD 5.1
GTEX-ZE9C-1126-SM-4WWBD 5.1
GTEX-111CU-0726-SM-5GZYD 5.0
GTEX-PLZ6-0526-SM-3P61C 5.0
GTEX-U4B1-0826-SM-4DXTW 5.0
GTEX-P4PP-0626-SM-3NM9X 4.9
GTEX-P4QT-0626-SM-3NMCP 4.9
GTEX-TKQ1-0326-SM-4DXSM 4.9
GTEX-WQUQ-1626-SM-4OOSH 4.9
GTEX-U3ZM-0526-SM-4DXTB 4.8
GTEX-XQ8I-1526-SM-4BOOH 4.8
GTEX-147F3-0826-SM-5NQA7 4.7
GTEX-PWN1-0626-SM-48TDT 4.7
GTEX-W5WG-1626-SM-4LMKG 4.7
GTEX-WH7G-0926-SM-4LVMJ 4.7
GTEX-ZT9W-1326-SM-51MTB 4.7
GTEX-ZYVF-2226-SM-5GIDD 4.7
GTEX-1122O-1726-SM-5GICM 4.6
GTEX-OXRP-0926-SM-48TC1 4.6
GTEX-WEY5-0926-SM-4LMI4 4.6
GTEX-YB5E-0926-SM-4WWDQ 4.6
GTEX-ZTSS-0626-SM-59867 4.6
GTEX-13PVR-1826-SM-5Q5CC 4.5
GTEX-QEG4-0726-SM-4R1JL 4.5
GTEX-S4P3-0426-SM-4AD56 4.5
GTEX-UJMC-0926-SM-4IHLK 4.5
GTEX-ZPCL-1426-SM-57WEC 4.5
GTEX-14A6H-1326-SM-5NQBC 4.4
GTEX-X4LF-0626-SM-4QASB 4.4
GTEX-ZVP2-1326-SM-57WCE 4.4
GTEX-11I78-1526-SM-5A5K7 4.3
GTEX-131YS-1426-SM-5IJF7 4.3
GTEX-1399R-0826-SM-5IJEL 4.3
GTEX-1399S-1326-SM-5P9GH 4.3
GTEX-ZLV1-0526-SM-4WWD4 4.3
GTEX-13FTX-0526-SM-5IFGS 4.2
GTEX-13QJ3-1726-SM-5RQK9 4.2
GTEX-T8EM-0526-SM-4DM64 4.2
GTEX-12BJ1-1626-SM-5HL8Y 4.1
GTEX-148VJ-1026-SM-5LU98 4.1
GTEX-OXRN-1726-SM-3NM9B 4.1
GTEX-S95S-0426-SM-4B64I 4.1
GTEX-REY6-1326-SM-48FDO 4.0
GTEX-ZF29-1326-SM-4WWB6 4.0
GTEX-117YX-1626-SM-5GZZG 3.9
GTEX-14H4A-1626-SM-5SI69 3.9
GTEX-Z9EW-0526-SM-5HL8S 3.9
GTEX-XOTO-2126-SM-4B64U 3.8
GTEX-117YW-1926-SM-5H121 3.7
GTEX-13QBU-1026-SM-5LU3R 3.7
GTEX-12ZZX-1326-SM-5DUWI 3.6
GTEX-132QS-1426-SM-5P9GE 3.6
GTEX-XQ3S-1126-SM-4BOPK 3.6
GTEX-ZG7Y-1126-SM-4WWEZ 3.6
GTEX-R55C-0826-SM-48FCL 3.5
GTEX-PWCY-0726-SM-48TCS 3.4
GTEX-T5JW-1326-SM-4DM5G 3.4
GTEX-ZYW4-1326-SM-5E45N 3.4
GTEX-T6MO-0526-SM-4DM6R 3.3
GTEX-XUZC-0426-SM-4BOPE 3.3
GTEX-11GSP-1826-SM-5N9DQ 3.2
GTEX-13FLV-1126-SM-5J2NO 3.0
GTEX-ZZ64-0226-SM-5E44X 3.0
GTEX-XBEW-1326-SM-4AT63 2.9
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

18.6

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 18.6
FF:10015-101C6 68,74,75 years, mixed 18.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.