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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:209.9RPKM
FANTOM5:354.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:High
 

Antibody staining

Antibody HPA015768

 

Antibody CAB000073

 

Antibody CAB078196

 

Glial cells

High   High   High  

Neuronal cells

Not detected   Medium   Not detected  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

209.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 209.9
Samples: 117

Max RPKM: 510.7
Min RPKM: 88.8
Std RPKM: 68.7
Median RPKM: 196.5
GTEX-12WSA-0011-R5b-SM-5GU5I 510.7
GTEX-NPJ7-0011-R5a-SM-33HBK 453.9
GTEX-139TT-0011-R5b-SM-5K7W8 362.5
GTEX-12WSB-0011-R5b-SM-5GU67 361.4
GTEX-1445S-0011-R5a-SM-5PNUS 350.6
GTEX-12WSH-0011-R5b-SM-5P9F3 348.6
GTEX-X4XX-0011-R5A-SM-46MWN 336.6
GTEX-139T8-0011-R5b-SM-5J1MO 324.9
GTEX-X261-0011-R5A-SM-3NMB4 317.9
GTEX-144GO-0011-R5a-SM-5PNUR 315.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 294.8
GTEX-ZV68-0011-R5a-SM-4YCDW 294.2
GTEX-WL46-0011-R5A-SM-3LK6V 293.6
GTEX-13FLV-0011-R5a-SM-5LZWT 289.6
GTEX-13NYB-0011-R5a-SM-5MR45 280.3
GTEX-11WQC-0011-R5a-SM-5BC74 275.9
GTEX-13JVG-0011-R5a-SM-5MR4O 271.6
GTEX-ZUA1-0011-R5b-SM-51MTG 271.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 263.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 262.7
GTEX-11UD1-0011-R5b-SM-5P9FP 260.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 254.9
GTEX-NL4W-0011-R5a-SM-2I3GD 254.8
GTEX-11H98-0011-R5b-SM-57WCF 253.5
GTEX-13X6K-0011-R5b-SM-5PNUE 250.3
GTEX-13CZV-0011-R5a-SM-5K7XA 249.9
GTEX-T6MN-0011-R5A-SM-32QPD 249.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 249.7
GTEX-13JUV-0011-R5a-SM-5LZY5 243.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 242.4
GTEX-OXRN-0011-R5A-SM-2I5EF 241.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 240.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 238.8
GTEX-13CIG-0011-R5b-SM-5L3F2 237.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 231.6
GTEX-TSE9-0011-R5A-SM-3DB7J 231.5
GTEX-XMD1-0011-R5A-SM-4AT47 231.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 229.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 226.5
GTEX-139TS-0011-R5b-SM-5J2MZ 224.1
GTEX-13FLW-0011-R5a-SM-5LZX6 221.4
GTEX-12WSD-0011-R5b-SM-5CVNG 219.9
GTEX-ZXG5-0011-R5b-SM-57WBN 217.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 215.5
GTEX-13OVH-0011-R5b-SM-5KM4L 215.0
GTEX-13112-0011-R5b-SM-5DUV8 214.4
GTEX-13CF2-0011-R5a-SM-5LZWS 214.0
GTEX-R55E-0011-R5A-SM-2TC5N 213.7
GTEX-RU72-0011-R5A-SM-2TF6U 212.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 210.7
GTEX-T5JC-0011-R5A-SM-32PLK 207.9
GTEX-YJ89-0011-R5a-SM-4V6GM 207.7
GTEX-XOTO-0011-R5A-SM-4B657 206.3
GTEX-1477Z-0011-R5b-SM-5PNUO 205.6
GTEX-13FHP-0011-R5b-SM-5LZY2 204.7
GTEX-ZE7O-0011-R5a-SM-57WBO 204.0
GTEX-ZVT3-0011-R5a-SM-51MSI 201.0
GTEX-145MG-0011-R5b-SM-5S2VU 197.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 196.5
GTEX-12WSC-0011-R5b-SM-5CVNS 196.4
GTEX-YFC4-0011-R5a-SM-4RGLR 196.1
GTEX-QMR6-0011-R5A-SM-32PKT 196.0
GTEX-132Q8-0011-R5a-SM-5IJDM 193.7
GTEX-12ZZX-0011-R5a-SM-5HL89 191.1
GTEX-11GSP-0011-R5a-SM-57WBE 190.1
GTEX-P44H-0011-R5A-SM-2XCEX 189.7
GTEX-13X6I-0011-R5a-SM-5PNWW 186.9
GTEX-NL3H-0011-R5a-SM-2I3GB 185.6
GTEX-13OW5-0011-R5b-SM-5L3FR 185.2
GTEX-S7SE-0011-R5A-SM-2XCDA 185.0
GTEX-1399T-0011-R5b-SM-5IJDK 184.8
GTEX-11OF3-0011-R5a-SM-57WB4 183.9
GTEX-11NV4-0011-R5a-SM-5NQ88 183.2
GTEX-OHPN-0011-R5A-SM-2I5FF 182.6
GTEX-N7MT-0011-R5a-SM-2I3G6 181.8
GTEX-QVJO-0011-R5A-SM-2S1QM 179.7
GTEX-RVPV-0011-R5A-SM-2TF69 179.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 177.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 174.1
GTEX-S7PM-0011-R5A-SM-3NM8G 174.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 172.9
GTEX-WVLH-0011-R5A-SM-3MJFW 171.8
GTEX-13OW7-0011-R5b-SM-5O9DM 169.9
GTEX-14BIM-0011-R5b-SM-5S2RM 169.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 168.7
GTEX-13OW6-0011-R5a-SM-5O9BK 167.2
GTEX-12WSF-0011-R5a-SM-5HL8K 166.6
GTEX-144GL-0011-R5b-SM-5PNUJ 166.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 165.4
GTEX-13G51-0011-R5a-SM-5L3EB 161.7
GTEX-RVPU-0011-R5A-SM-2XCAD 161.7
GTEX-WZTO-0011-R5B-SM-3NMC5 161.6
GTEX-WWYW-0011-R5A-SM-3NB3E 160.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 159.8
GTEX-145LS-0011-R5a-SM-5SI65 158.3
GTEX-14BIN-0011-R5b-SM-5SI78 154.7
GTEX-13OVL-0011-R5b-SM-5L3FU 154.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 150.6
GTEX-13SLX-0011-R5a-SM-5O9BV 149.4
GTEX-13FXS-0011-R5b-SM-5LZYE 148.5
GTEX-13NZA-0011-R5b-SM-5KM4K 147.9
GTEX-N7MS-0011-R5a-SM-2HMK8 146.3
GTEX-13NYS-0011-R5a-SM-5MR4D 146.2
GTEX-13VXU-0011-R5a-SM-5O9D7 145.2
GTEX-13X6J-0011-R5b-SM-5PNWT 142.7
GTEX-131YS-0011-R5b-SM-5K7YB 141.0
GTEX-UTHO-0011-R5A-SM-3GIJD 135.0
GTEX-14ABY-0011-R5b-SM-5SI7B 130.1
GTEX-T2IS-0011-R5A-SM-32QP4 125.0
GTEX-13O3O-0011-R5b-SM-5KM44 124.8
GTEX-13S7M-0011-R5b-SM-5P9HS 116.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 111.1
GTEX-1313W-0011-R5b-SM-5L3EP 107.8
GTEX-PVOW-0011-R5A-SM-32PL7 104.2
GTEX-145MH-0011-R5a-SM-5P9JT 101.6
GTEX-Z93S-0011-R5b-SM-4RGNI 96.3
GTEX-X585-0011-R5A-SM-46MVI 88.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

354.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 354.8
FF:10379-105H1 89 years, female 416.4
FF:10164-103B2 76 years, female 293.1

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