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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:628.0TPM
GTEx:195.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:High
Neuronal cells:High
Neuropil:High
 

Antibody staining

Antibody HPA015768

 

Antibody CAB000073

 

Antibody CAB078196

 

Endothelial cells

Medium   Medium   Medium  

Glial cells

High   High   High  

Neuronal cells

Not detected   Low   Not detected  

Neuropil

Low   High   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

628.0

N/A Male, age 5
Sample 1
TPM: 476.1
overview Female, age 40
Sample 2
TPM: 639.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 768.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

195.0

GTEx sample id

RPKM

132.8168.1245.750.7397.5050100150200250300350400450500550600650
 
132.8168.1245.750.7397.5050100150200250300350400450500550600650

Brain - Cortex

Brain - Cortex
RPKM: 197.7
Samples: 114

Max RPKM: 669.4
Min RPKM: 50.7
Std RPKM: 100.5
Median RPKM: 168.1
GTEX-13G51-3026-SM-5IJB8 669.4
GTEX-1445S-3026-SM-5O9BR 568.0
GTEX-144FL-3026-SM-5O99C 507.6
GTEX-QVUS-2826-SM-3GADB 397.5
GTEX-N7MT-1126-SM-5SI7V 386.3
GTEX-13JUV-2926-SM-5LZX7 359.9
GTEX-11GSP-3226-SM-5986O 359.0
GTEX-13OVJ-2826-SM-5L3GW 356.0
GTEX-13OW8-2826-SM-5L3GC 340.9
GTEX-13FHP-3026-SM-5IJBS 336.9
GTEX-1192X-3126-SM-5N9BY 329.7
GTEX-13X6K-2926-SM-5Q5D5 327.9
GTEX-139T8-1026-SM-5J2MC 323.1
GTEX-NPJ7-2726-SM-2I3FT 314.7
GTEX-1117F-3226-SM-5N9CT 306.8
GTEX-13PVQ-3026-SM-5SI93 304.0
GTEX-11OC5-0726-SM-5P9JK 292.3
GTEX-111FC-3126-SM-5GZZ2 291.7
GTEX-ZE7O-3126-SM-5HL5X 286.3
GTEX-147GR-3026-SM-5S2ML 284.9
GTEX-11TTK-2926-SM-5PNYP 281.4
GTEX-13FHO-3026-SM-5J1O9 275.6
GTEX-11GS4-3126-SM-5A5LH 270.7
GTEX-11EMC-3226-SM-5EGKW 264.1
GTEX-13FLW-1426-SM-5K7YE 263.1
GTEX-1399T-3026-SM-5KLZC 260.5
GTEX-12WSD-3126-SM-5HL7P 259.0
GTEX-13NYB-3026-SM-5IJD7 258.9
GTEX-12ZZY-3026-SM-5GCOU 246.0
GTEX-11OF3-2926-SM-5HL78 244.6
GTEX-13JVG-3126-SM-5L3FH 243.1
GTEX-11ONC-2926-SM-5P9JM 238.6
GTEX-PWO3-0926-SM-2I5EY 231.2
GTEX-QVJO-1426-SM-2S1QY 228.8
GTEX-Q2AG-2926-SM-2HMJ3 219.3
GTEX-11EI6-3026-SM-5GZZO 210.6
GTEX-11GSO-2926-SM-5HL73 210.1
GTEX-14A5I-2926-SM-5Q5CQ 206.7
GTEX-12WSA-2926-SM-5EQ4D 204.0
GTEX-ZAJG-3126-SM-5HL9J 202.1
GTEX-ZVT3-3026-SM-5E43N 194.7
GTEX-XLM4-3026-SM-4AT6L 194.5
GTEX-13X6J-3026-SM-5Q5CU 193.3
GTEX-12ZZW-2926-SM-5LZUP 192.9
GTEX-13S7M-3126-SM-5RQJQ 192.5
GTEX-11NV4-2126-SM-5N9DS 192.4
GTEX-Y8DK-0826-SM-4TT3T 190.9
GTEX-NPJ8-1526-SM-2D7VU 190.0
GTEX-13O3Q-2926-SM-5KM45 189.8
GTEX-145MG-3026-SM-5RQJA 189.5
GTEX-12ZZZ-3026-SM-5BC67 185.4
GTEX-OXRN-2426-SM-2I5EQ 184.2
GTEX-131XW-3126-SM-5LZUC 179.1
GTEX-13OW7-3026-SM-5L3GY 178.1
GTEX-11WQK-3026-SM-5EQL6 174.1
GTEX-ZZPT-3026-SM-5GZXH 170.1
GTEX-13QIC-2926-SM-5J2NF 169.2
GTEX-145LS-3126-SM-5Q5BY 166.9
GTEX-11NUK-2926-SM-5A5MD 166.1
GTEX-13OW6-3026-SM-5J2MI 164.7
GTEX-13OVH-3026-SM-5MR4N 162.8
GTEX-YJ89-3026-SM-5IFJI 161.5
GTEX-RU72-3026-SM-5SI7Y 161.1
GTEX-YFC4-3126-SM-5PNV6 159.7
GTEX-QDT8-2926-SM-32PKC 155.9
GTEX-11DXW-1126-SM-5H12Q 155.7
GTEX-13NYC-2826-SM-5K7WR 155.4
GTEX-144GL-3026-SM-5Q5CW 153.4
GTEX-WHSE-3026-SM-3P5ZH 153.4
GTEX-1128S-2726-SM-5H12C 152.4
GTEX-Y111-2726-SM-4TT3N 150.3
GTEX-11DXY-3226-SM-5GIDE 148.5
GTEX-145MF-2726-SM-5O995 148.0
GTEX-XOTO-3026-SM-4B65M 146.7
GTEX-12WSH-3026-SM-5CVNI 143.2
GTEX-13SLX-3126-SM-5S2Q5 142.3
GTEX-ZAK1-3026-SM-5S2MJ 141.2
GTEX-14ASI-3026-SM-5S2PN 141.1
GTEX-R55F-1326-SM-5S2V4 140.6
GTEX-13IVO-2926-SM-5L3CZ 139.8
GTEX-13FXS-3126-SM-5J2NN 138.8
GTEX-13O3O-3126-SM-5KM3H 137.2
GTEX-12WSC-3026-SM-5GCNF 136.5
GTEX-11O72-2926-SM-5BC4V 134.8
GTEX-14BMV-3026-SM-5S2PQ 134.6
GTEX-13PL6-3126-SM-5LUAR 132.2
GTEX-ZYFD-3026-SM-5E44C 130.7
GTEX-1313W-3126-SM-5LZUI 130.6
GTEX-132Q8-3026-SM-5PNVG 130.3
GTEX-T6MN-2626-SM-32PMQ 129.6
GTEX-QMR6-1426-SM-32PLA 129.3
GTEX-ZUA1-3026-SM-59HJC 128.7
GTEX-12ZZX-2926-SM-5GCOQ 122.3
GTEX-13VXU-2926-SM-5LU5C 121.6
GTEX-131YS-3126-SM-5KLYT 119.8
GTEX-UTHO-3026-SM-3GAFB 109.6
GTEX-11PRG-2926-SM-5987A 108.5
GTEX-WVLH-3026-SM-3MJG9 106.6
GTEX-T5JC-2426-SM-3NMDB 105.9
GTEX-13NYS-3126-SM-5KLYV 104.4
GTEX-WWYW-3126-SM-3NB39 102.2
GTEX-145MH-3026-SM-5Q5DZ 101.1
GTEX-RNOR-2326-SM-2TF4I 101.0
GTEX-117XS-3026-SM-5N9CA 96.2
GTEX-X4XX-3026-SM-3NMB2 92.2
GTEX-WZTO-2926-SM-3NM9I 91.2
GTEX-11ZUS-2926-SM-5FQSL 90.7
GTEX-TSE9-3026-SM-3DB76 90.1
GTEX-Z93S-2926-SM-57WB9 83.1
GTEX-WL46-2926-SM-3LK82 82.6
GTEX-T2IS-3026-SM-32QPM 82.4
GTEX-X585-3026-SM-46MWF 81.1
GTEX-12126-1026-SM-5P9JJ 73.8
GTEX-PVOW-2526-SM-2XCF7 50.7
Show all
116.9156.9219.525.9365.40100200300400500600700
 
116.9156.9219.525.9365.40100200300400500600700

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 192.0
Samples: 108

Max RPKM: 754.8
Min RPKM: 25.9
Std RPKM: 123.3
Median RPKM: 156.9
GTEX-12WSD-0011-R10b-SM-5GU79 754.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 666.2
GTEX-1445S-0011-R10a-SM-5PNWB 634.9
GTEX-XMD1-0011-R10A-SM-4AT4A 502.1
GTEX-13JVG-0011-R10b-SM-5KM2P 498.1
GTEX-139TS-0011-R10a-SM-5K7TU 456.9
GTEX-ZV68-0011-R10a-SM-51MT7 378.4
GTEX-13SLW-0011-R10a-SM-5S2UI 374.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 365.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 326.6
GTEX-1477Z-0011-R10b-SM-5S2RF 325.9
GTEX-13JUV-0011-R10b-SM-5LZXR 323.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 318.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 309.5
GTEX-RVPU-0011-R10A-SM-2XCAH 299.3
GTEX-13FLW-0011-R10b-SM-5LZZF 295.0
GTEX-P44H-0011-R10A-SM-2XCEK 288.4
GTEX-12WSA-0011-R10b-SM-5P9ET 281.5
GTEX-11WQC-0011-R10a-SM-57WCT 269.1
GTEX-13OW8-0011-R10a-SM-5L3H6 257.1
GTEX-NL4W-0011-R10A-SM-2I3DY 250.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 240.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 230.1
GTEX-147GR-0011-R10b-SM-5S2UM 228.4
GTEX-ZUA1-0011-R10a-SM-51MT6 227.1
GTEX-131XW-0011-R10a-SM-5DUVA 225.7
GTEX-14BIL-0011-R10a-SM-5SI75 221.4
GTEX-ZXG5-0011-R10a-SM-57WDD 218.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 214.3
GTEX-13NZA-0011-R10b-SM-5KM54 210.3
GTEX-13X6K-0011-R10a-SM-5P9JR 207.4
GTEX-X261-0011-R10B-SM-4E3JT 204.6
GTEX-145LU-0011-R10a-SM-5PNWJ 201.7
GTEX-XLM4-0011-R10A-SM-4AT5P 198.1
GTEX-QVUS-0011-R10A-SM-3GIK3 197.9
GTEX-14753-0011-R10b-SM-5S2WE 197.0
GTEX-13OW6-0011-R10a-SM-5L3HE 196.6
GTEX-OXRO-0011-R10A-SM-2I5EH 195.3
GTEX-N7MT-0011-R10A-SM-2I3E1 192.9
GTEX-13NYB-0011-R10a-SM-5KM43 190.3
GTEX-13FHO-0011-R10b-SM-5J2MM 189.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 186.6
GTEX-11H98-0011-R10b-SM-5NQ98 186.5
GTEX-11WQK-0011-R10a-SM-5BC6R 185.2
GTEX-ZVT3-0011-R10b-SM-57WB6 183.5
GTEX-13G51-0011-R10b-SM-5LZYF 182.2
GTEX-147F4-0011-R10b-SM-5S2WC 179.7
GTEX-13O3O-0011-R10a-SM-5LUA9 178.2
GTEX-13N2G-0011-R10a-SM-5MR34 177.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 175.0
GTEX-13OVL-0011-R10a-SM-5L3GS 174.1
GTEX-OXRN-0011-R10A-SM-2I5GC 170.6
GTEX-11ZUS-0011-R10b-SM-5BC79 167.1
GTEX-TSE9-0011-R10A-SM-3DB7O 158.2
GTEX-12WSF-0011-R10a-SM-5LZVH 155.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 154.5
GTEX-YFC4-0011-R10a-SM-4SOK5 150.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 150.3
GTEX-WWYW-0011-R10A-SM-3NB35 148.6
GTEX-13O3Q-0011-R10b-SM-5KM39 147.8
GTEX-13CZV-0011-R10b-SM-5LZYD 146.4
GTEX-T5JC-0011-R10A-SM-32PM2 146.0
GTEX-13X6I-0011-R10a-SM-5PNWI 144.0
GTEX-12WSM-0011-R10a-SM-5DUWV 143.2
GTEX-YJ89-0011-R10a-SM-4SOK9 142.9
GTEX-13QJC-0011-R10a-SM-5SI63 141.1
GTEX-Z93S-0011-R10a-SM-4RGNM 141.1
GTEX-QMR6-0011-R10A-SM-32PKO 140.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 138.3
GTEX-13FXS-0011-R10a-SM-5J2MA 135.5
GTEX-13NYS-0011-R10a-SM-5MR4S 135.1
GTEX-145LS-0011-R10a-SM-5PNUQ 129.3
GTEX-12WSH-0011-R10a-SM-5LZUS 127.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 127.1
GTEX-13S7M-0011-R10b-SM-5PNZB 126.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 126.1
GTEX-13X6J-0011-R10b-SM-5PNWA 124.8
GTEX-14BIN-0011-R10a-SM-5S2UA 123.8
GTEX-13OW7-0011-R10a-SM-5L3H3 121.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 121.3
GTEX-13QIC-0011-R10a-SM-5O9C7 117.6
GTEX-145MG-0011-R10a-SM-5PNWG 114.7
GTEX-S7SE-0011-R10A-SM-2XCDF 113.7
GTEX-12126-0011-R10b-SM-5BC6T 112.4
GTEX-131YS-0011-R10b-SM-5EQ5N 111.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 110.9
GTEX-12WSC-0011-R10a-SM-5GU57 109.9
GTEX-ZF28-0011-R10a-SM-4WWEH 108.7
GTEX-13N1W-0011-R10b-SM-5MR4H 106.3
GTEX-N7MS-0011-R10A-SM-2HMJK 103.8
GTEX-13SLX-0011-R10a-SM-5P9HV 103.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 101.0
GTEX-WVLH-0011-R10A-SM-3MJFM 99.9
GTEX-131XH-0011-R10a-SM-5EGLJ 99.7
GTEX-QDT8-0011-R10A-SM-32PKG 92.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 91.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 89.3
GTEX-145MH-0011-R10b-SM-5PNUK 88.6
GTEX-WZTO-0011-R10B-SM-4E3KB 87.9
GTEX-X4EP-0011-R10B-SM-4QASJ 84.0
GTEX-13IVO-0011-R10a-SM-5LZY3 83.8
GTEX-T6MN-0011-R10A-SM-32QP7 75.0
GTEX-X4XX-0011-R10B-SM-46MWO 70.8
GTEX-1313W-0011-R10b-SM-5DUXA 54.1
GTEX-12WSE-0011-R10b-SM-5P9JV 51.3
GTEX-NL3H-0011-R10A-SM-2I3E9 34.4
GTEX-WL46-0011-R10A-SM-3MJFQ 34.3
GTEX-X585-0011-R10A-SM-46MUY 25.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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