We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RNF123
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:9.4TPM
GTEx:12.7RPKM
FANTOM5:4.5Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Medium
 

Antibody staining

Antibody HPA065983

 

Bile duct cells

Medium  

Hepatocytes

Medium  
 
 
 

LIVER - HPA RNA-seq

Average TPM

9.4

N/A Female, age 60
Sample 1
TPM: 10.2
overview Male, age 54
Sample 2
TPM: 8.0
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 8.5
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 3.4
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 3.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 10.8
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 9.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 15.8
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 11.2
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 12.5
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

12.7

GTEx sample id

RPKM

10.012.215.14.522.2024681012141618202224
 
10.012.215.14.522.2024681012141618202224

Liver

Liver
RPKM: 12.7
Samples: 119

Max RPKM: 24.7
Min RPKM: 4.5
Std RPKM: 3.8
Median RPKM: 12.2
GTEX-WQUQ-1926-SM-4OOSA 24.7
GTEX-UPIC-0926-SM-4IHLV 24.6
GTEX-QDVN-0826-SM-48TZ2 22.2
GTEX-YEC4-0826-SM-5P9FV 21.3
GTEX-13PVR-0126-SM-5S2PY 20.8
GTEX-ZF29-2026-SM-4WWB7 19.8
GTEX-X4XY-1626-SM-46MVN 19.0
GTEX-13113-1326-SM-5GCOI 18.9
GTEX-13N11-0926-SM-5IJG2 18.8
GTEX-S4Z8-0526-SM-4AD4T 18.8
GTEX-12696-0826-SM-5EGGE 17.9
GTEX-WFON-1726-SM-4LVMQ 17.9
GTEX-12WSG-0626-SM-5FQTQ 17.4
GTEX-S32W-1926-SM-4AD63 17.4
GTEX-R53T-0326-SM-48FEC 17.2
GTEX-12WSL-0226-SM-5CVMJ 17.0
GTEX-RN64-1826-SM-48FDV 17.0
GTEX-13FTW-1126-SM-5J2NV 16.8
GTEX-X3Y1-2726-SM-4PQZH 16.8
GTEX-14AS3-0126-SM-5Q5F4 16.4
GTEX-13NZ9-1326-SM-5MR3V 16.3
GTEX-XBEC-1526-SM-4AT68 16.3
GTEX-RM2N-1926-SM-48FCU 16.2
GTEX-146FH-1526-SM-5NQBU 16.1
GTEX-X4EO-1126-SM-4QARQ 16.0
GTEX-Z9EW-0426-SM-5CVM9 15.9
GTEX-ZVP2-0626-SM-51MSO 15.9
GTEX-OOBJ-0826-SM-3NB2K 15.5
GTEX-ZZPU-0426-SM-5GZYH 15.3
GTEX-QEG4-1826-SM-4R1JN 15.2
GTEX-11NV4-1326-SM-5HL6V 15.1
GTEX-11EQ9-0526-SM-5A5JZ 15.0
GTEX-S33H-1626-SM-4AD68 14.8
GTEX-YFC4-1526-SM-5IFJS 14.7
GTEX-13NZB-0626-SM-5IFH6 14.4
GTEX-P78B-1326-SM-3P611 14.4
GTEX-Q734-0326-SM-48U15 14.4
GTEX-QV44-0326-SM-4R1KD 14.4
GTEX-TKQ2-1726-SM-4DXUP 14.4
GTEX-132NY-0926-SM-5P9G3 14.2
GTEX-QEL4-1226-SM-447A4 14.2
GTEX-WZTO-0626-SM-4PQYY 14.2
GTEX-X261-1726-SM-4PQYT 14.0
GTEX-1399T-0826-SM-5IFES 13.9
GTEX-131YS-1626-SM-5HL6C 13.8
GTEX-QESD-2026-SM-447BI 13.5
GTEX-145MF-0826-SM-5QGQA 13.4
GTEX-XOTO-0826-SM-4B65O 13.4
GTEX-14E1K-0326-SM-5S2PE 13.3
GTEX-Y5LM-0426-SM-4VBRO 13.0
GTEX-RNOR-1426-SM-48FDJ 12.9
GTEX-144GM-1326-SM-5LU5E 12.8
GTEX-REY6-1226-SM-48FDR 12.8
GTEX-139TU-0826-SM-5IJFG 12.7
GTEX-PX3G-0826-SM-48TZS 12.7
GTEX-RTLS-1326-SM-46MUN 12.5
GTEX-139YR-0226-SM-5IFEM 12.3
GTEX-1497J-0726-SM-5Q5D1 12.3
GTEX-ZVT3-1626-SM-5GU66 12.3
GTEX-11DXZ-0126-SM-5EGGY 12.2
GTEX-YB5E-0326-SM-5IFHU 12.2
GTEX-ZAB5-0426-SM-5CVMI 12.2
GTEX-ZPU1-0826-SM-57WG2 12.1
GTEX-11OF3-0726-SM-5BC4Z 12.0
GTEX-1399R-1226-SM-5P9GF 11.9
GTEX-14A5I-1726-SM-5QGQ5 11.6
GTEX-11ZVC-0726-SM-5FQT9 11.5
GTEX-13N2G-0926-SM-5IFGJ 11.5
GTEX-VUSG-0126-SM-4KL1X 11.5
GTEX-139TS-1426-SM-5IFJD 11.4
GTEX-147F4-1426-SM-5LUA8 11.3
GTEX-SJXC-1226-SM-4DM78 11.2
GTEX-UPK5-1426-SM-4JBHH 11.2
GTEX-T6MN-1226-SM-3NMA5 11.0
GTEX-WYVS-1926-SM-4PQZ2 11.0
GTEX-11DXY-0526-SM-5EGGQ 10.9
GTEX-14C38-1526-SM-5RQJ7 10.8
GTEX-Y5V5-0926-SM-4VBPZ 10.8
GTEX-12WSM-0726-SM-5GCOW 10.6
GTEX-RU72-1426-SM-46MUF 10.6
GTEX-11NUK-1226-SM-5P9GM 10.4
GTEX-ZF2S-3026-SM-4WWCH 10.4
GTEX-13OW6-2626-SM-5IFF2 10.3
GTEX-11WQC-0726-SM-5EQMR 10.2
GTEX-RWSA-1426-SM-47JXA 10.2
GTEX-UTHO-2426-SM-4JBHD 10.2
GTEX-1212Z-0226-SM-59HLF 10.1
GTEX-ZAB4-0826-SM-5LU9D 10.1
GTEX-14DAQ-1726-SM-5S2R2 10.0
GTEX-X4EP-1026-SM-4QAS5 10.0
GTEX-13VXU-0926-SM-5IFFH 9.9
GTEX-13FTZ-0726-SM-5IFFY 9.7
GTEX-YECK-1926-SM-4W21H 9.6
GTEX-ZTPG-1426-SM-51MT3 9.5
GTEX-12KS4-1326-SM-5LUB3 9.4
GTEX-ZVT4-0626-SM-5E45T 9.4
GTEX-ZYT6-0626-SM-5E45V 9.4
GTEX-12WSD-1426-SM-5GCN9 9.3
GTEX-U3ZN-0226-SM-3DB8D 9.1
GTEX-145LU-1326-SM-5LU9N 8.9
GTEX-11ZTS-1426-SM-5EQMM 8.8
GTEX-11GSP-0626-SM-5986T 8.7
GTEX-13FLV-0326-SM-5N9DJ 8.7
GTEX-13O3O-1826-SM-5IFGW 8.7
GTEX-11ZUS-2526-SM-59872 8.5
GTEX-13NYB-1026-SM-5IFH3 8.5
GTEX-13SLX-1226-SM-5S2Q6 8.4
GTEX-131XH-0626-SM-5LZWH 8.3
GTEX-13112-1426-SM-5EGH8 8.2
GTEX-131XE-0326-SM-5LZVO 7.6
GTEX-Q2AG-1126-SM-48U1P 7.6
GTEX-13QJC-0726-SM-5RQJK 7.5
GTEX-12WSI-0226-SM-5GCNA 7.4
GTEX-14753-1626-SM-5NQ9L 7.2
GTEX-ZYY3-0626-SM-5NQ6W 7.1
GTEX-147JS-1126-SM-5RQIW 7.0
GTEX-145MO-2326-SM-5NQ9K 6.6
GTEX-1269C-0626-SM-5FQSS 6.2
GTEX-12ZZZ-1326-SM-59HKW 4.5
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

4.5

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 4.5
FF:10018-101C9 64,69,70 years, mixed 4.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.