Tissue expression of ALYREF - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	30.8	TPM
GTEx:	21.1	RPKM
FANTOM5:	52.5	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Fibroblasts:	High
Peripheral nerve:	High
Chondrocytes:	High

Antibody staining	Antibody HPA019799	Antibody CAB016281
Adipocytes	Medium	High
Fibroblasts	High	High
Peripheral nerve	High	High
Chondrocytes	High

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Fibroblasts:	High
Peripheral nerve:	High

Antibody staining	Antibody HPA019799	Antibody CAB016281
Adipocytes	High	High
Fibroblasts	High	High
Peripheral nerve	High	High

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	30.8

Female, age 80

Sample 1
TPM: 42.9

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 16.4

Female, age 57

Sample 3
TPM: 18.7

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 44.1

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 32.0

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	21.1

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 20.2

Samples: 350

Max RPKM: 37.7
Min RPKM: 8.8
Std RPKM: 4.6
Median RPKM: 19.6

GTEX-ZYFD-0226-SM-5NQ86

37.7

GTEX-ZYVF-0226-SM-5GIEG

37.0

GTEX-OOBK-0226-SM-2YUMF

34.2

GTEX-POMQ-2326-SM-5S2VS

33.5

GTEX-11H98-0226-SM-5NQ89

32.6

GTEX-QEG5-0326-SM-2S1PB

32.0

GTEX-144GM-1926-SM-5LUAN

31.7

GTEX-Y3IK-2526-SM-4WWDM

31.6

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 22.6

Samples: 227

Max RPKM: 55.4
Min RPKM: 6.4
Std RPKM: 6.5
Median RPKM: 21.5

GTEX-13X6H-1726-SM-5Q5EH

55.4

GTEX-ZYVF-1026-SM-5E44V

43.3

GTEX-133LE-0926-SM-5P9J1

41.6

GTEX-1128S-0926-SM-5GZZU

41.5

GTEX-Y5LM-0826-SM-4VDSW

40.3

GTEX-13QBU-1326-SM-5LU4K

39.9

GTEX-132QS-0826-SM-5K7WV

39.8

GTEX-13PVQ-2226-SM-5L3G9

39.6

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	52.5

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 52.5

FF:10010-101C1

65,65,76 years, mixed

52.5