We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ALYREF
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:43.6TPM
GTEx:30.9RPKM
FANTOM5:78.6Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:High
Cells in white pulp:High
 

Antibody staining

Antibody HPA019799

 

Antibody CAB016281

 

Cells in red pulp

High   High  

Cells in white pulp

Medium   High  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

43.6

overview Female, age 60
Sample 1
TPM: 46.0
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 57.3
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 50.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 41.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 23.2
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

30.9

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 30.9
Samples: 104

Max RPKM: 51.8
Min RPKM: 17.7
Std RPKM: 6.2
Median RPKM: 30.3
GTEX-PX3G-0926-SM-48U12 51.8
GTEX-U3ZH-0126-SM-4DXUK 49.0
GTEX-146FQ-0626-SM-5LU9U 47.5
GTEX-13N11-0126-SM-5KM2Z 45.1
GTEX-POMQ-0126-SM-48TD6 42.7
GTEX-131XE-1126-SM-5EGHW 42.2
GTEX-Y3IK-0126-SM-4WWE9 40.7
GTEX-ZP4G-0326-SM-4YCEF 39.7
GTEX-145MN-0126-SM-5RQHY 39.6
GTEX-YB5E-0426-SM-5IFHR 39.5
GTEX-QMRM-0226-SM-4R1K7 39.0
GTEX-ZLFU-0526-SM-4WWBN 38.6
GTEX-XMK1-0126-SM-4B65F 37.7
GTEX-13U4I-1626-SM-5IFFR 37.5
GTEX-QLQW-0126-SM-447BK 37.5
GTEX-11NSD-0426-SM-5N9CR 37.3
GTEX-13FH7-1326-SM-5IFG8 37.2
GTEX-T5JW-0126-SM-4DM6K 36.6
GTEX-O5YT-0926-SM-48TDG 36.1
GTEX-R55G-0226-SM-48FEI 36.1
GTEX-QV31-0126-SM-447BP 35.6
GTEX-XPVG-0626-SM-4B65B 35.6
GTEX-U3ZN-0126-SM-4DXUM 35.2
GTEX-ZPU1-1026-SM-4YCEQ 35.0
GTEX-13VXT-1326-SM-5LU3Y 34.5
GTEX-11P81-1326-SM-5GU5S 34.4
GTEX-1399R-0226-SM-5IJGG 34.3
GTEX-146FR-1926-SM-5NQA6 34.2
GTEX-RUSQ-0126-SM-47JWV 34.2
GTEX-11VI4-0126-SM-5GU6Z 33.9
GTEX-U4B1-0526-SM-4DXTK 33.7
GTEX-XXEK-0126-SM-4BRVU 33.5
GTEX-Y8LW-0126-SM-4VBS1 33.1
GTEX-13CF3-0226-SM-5J1NW 32.9
GTEX-VJYA-0126-SM-4KL1P 32.9
GTEX-13X6H-0726-SM-5Q5BX 32.4
GTEX-OOBJ-0926-SM-48TDO 32.4
GTEX-ZVP2-0526-SM-51MSC 32.3
GTEX-ZAB5-0526-SM-5CVMU 32.1
GTEX-X4LF-0226-SM-4QAS8 32.0
GTEX-14DAR-0326-SM-5S2PS 31.9
GTEX-12WSK-0126-SM-5GCO7 31.8
GTEX-XV7Q-0126-SM-4BRVK 31.8
GTEX-XUJ4-0226-SM-4BOP8 31.7
GTEX-YEC4-0126-SM-4W21T 31.7
GTEX-1399S-0226-SM-5IFFG 31.6
GTEX-131XG-0426-SM-5IFGD 31.5
GTEX-132QS-0226-SM-5IFFZ 31.1
GTEX-ZZPU-0126-SM-5E446 30.9
GTEX-13S86-0126-SM-5S2PI 30.6
GTEX-QCQG-0226-SM-48U28 30.5
GTEX-12WSG-0926-SM-5EGIH 30.4
GTEX-11XUK-0426-SM-5EQML 30.2
GTEX-12WSN-0126-SM-5DUX5 30.2
GTEX-117YX-2126-SM-5GIEL 30.0
GTEX-12WSJ-0526-SM-5GCOZ 30.0
GTEX-ZVZP-0726-SM-59HKA 29.3
GTEX-ZDTT-1026-SM-5KM19 29.1
GTEX-QV44-0126-SM-4R1KH 29.0
GTEX-ZYWO-0226-SM-5GZX3 28.9
GTEX-S3XE-0626-SM-4AD6B 28.7
GTEX-139YR-0426-SM-5IFFV 28.5
GTEX-PW2O-0126-SM-48TC8 28.5
GTEX-XQ8I-1726-SM-4BOQB 28.5
GTEX-ZYFG-0726-SM-5GIDX 28.0
GTEX-XGQ4-0126-SM-4AT4H 27.9
GTEX-Q734-0226-SM-48U1A 27.7
GTEX-Y5LM-0326-SM-4VBRN 27.7
GTEX-13PL7-1126-SM-5MR5O 27.5
GTEX-ZV6S-0826-SM-5NQ6Z 27.5
GTEX-P4QS-0926-SM-48TBS 27.3
GTEX-UPK5-1626-SM-4JBHI 27.3
GTEX-ZLWG-0426-SM-4WWFA 27.2
GTEX-12BJ1-0726-SM-5EGGF 27.0
GTEX-144GN-2126-SM-5O99D 26.7
GTEX-13111-0126-SM-5EGHO 26.6
GTEX-WHWD-0126-SM-4OORS 26.3
GTEX-YFCO-0926-SM-5LUA5 26.0
GTEX-147F3-0126-SM-5NQBJ 25.9
GTEX-QDVN-0526-SM-48TZ4 25.9
GTEX-XAJ8-0126-SM-47JYG 25.9
GTEX-P4PP-0926-SM-48TBZ 25.6
GTEX-1122O-0526-SM-5N9DM 25.4
GTEX-OIZH-0926-SM-48TBR 25.4
GTEX-Q2AH-0226-SM-48U1I 25.3
GTEX-139T6-0226-SM-5IFGZ 25.2
GTEX-UJHI-0126-SM-4IHLP 25.1
GTEX-Y114-0726-SM-4TT6U 24.9
GTEX-S4Z8-0226-SM-4AD5K 24.6
GTEX-14E6E-1226-SM-5S2R5 24.2
GTEX-X3Y1-0126-SM-4PQZA 24.2
GTEX-YB5K-1926-SM-4VDT4 24.2
GTEX-11P7K-0426-SM-5BC5H 24.0
GTEX-W5WG-0626-SM-4SOID 24.0
GTEX-13PVR-0326-SM-5RQJY 23.9
GTEX-11EQ9-0426-SM-5A5JY 23.6
GTEX-11DXX-0726-SM-5H12X 23.5
GTEX-11LCK-0126-SM-5A5M5 23.4
GTEX-Y3I4-0126-SM-4TT26 22.6
GTEX-Z9EW-0726-SM-5HL9H 22.5
GTEX-WFON-0126-SM-4LVM9 21.9
GTEX-1211K-0426-SM-5FQTP 21.6
GTEX-PLZ6-0126-SM-48TC6 20.2
GTEX-X585-1826-SM-4QAS3 17.7
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

78.6

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 78.6
FF:10025-101D7 39,50,70 years, male 78.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.