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Gene name

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Chromosome

External id

In atlas

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Reliability

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Validation

Method

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Method

Validation

Method

Validation

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Cell type

Expression

Tissue

Specificity

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Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

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S100A4
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:48.8TPM
GTEx:8.6RPKM
FANTOM5:47.4Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:Not detected
Leydig cells:Not detected
 

Antibody staining

Antibody HPA007973

 

Antibody CAB002618

 

Antibody CAB027387

 

Antibody CAB058698

 

Antibody CAB068227

 

Antibody CAB068228

 

Cells in seminiferous ducts

Not detected   Not detected   Not detected   Not detected   Not detected   Not detected  

Leydig cells

High   Not detected   Low   Not detected   Low   Low  
           
           
           

TESTIS - HPA RNA-seq

Average TPM

48.8

overview Male, age 56
Sample 1
TPM: 68.7
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 41.6
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 36.2
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 116.3
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 13.6
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 22.1
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 65.6
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 41.4
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 53.6
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 29.1
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

8.6

GTEx sample id

RPKM

 

Testis

Testis
RPKM: 8.6
Samples: 172

Max RPKM: 39
Min RPKM: 1.3
Std RPKM: 5.5
Median RPKM: 7.3
GTEX-OIZH-2126-SM-3NB1P 39.0
GTEX-145LT-0426-SM-5LUAP 32.3
GTEX-1399Q-2826-SM-5IJEZ 27.6
GTEX-VJYA-1426-SM-4KL1Y 27.2
GTEX-1399R-1626-SM-5P9GG 26.1
GTEX-PLZ5-1526-SM-3P5ZX 22.2
GTEX-13OW6-0126-SM-5IJGM 21.6
GTEX-12WSM-1326-SM-5GCP9 20.1
GTEX-QMRM-1526-SM-4R1K6 18.7
GTEX-ZVZP-2226-SM-57WBF 18.1
GTEX-PW2O-1426-SM-48TCD 17.8
GTEX-11ONC-2226-SM-5HL6D 17.2
GTEX-YFCO-1726-SM-4W21S 17.1
GTEX-Y8E4-2226-SM-5LU94 16.8
GTEX-YB5E-1926-SM-5IFIG 16.8
GTEX-V955-1926-SM-4KL1L 16.4
GTEX-S33H-0126-SM-4AD62 15.9
GTEX-ZT9X-1426-SM-5DUX1 15.2
GTEX-144GN-1626-SM-5Q5BU 15.0
GTEX-QV44-1726-SM-4R1KG 14.6
GTEX-ZAB4-0126-SM-5CVMG 13.3
GTEX-11NSD-1026-SM-5N9BE 13.2
GTEX-13OVH-0726-SM-5N9BU 12.9
GTEX-V1D1-2126-SM-4JBH4 12.7
GTEX-X3Y1-2626-SM-4PQZI 12.1
GTEX-ZYFC-0126-SM-5GIEH 11.9
GTEX-132QS-1226-SM-5P9GD 11.8
GTEX-14753-0626-SM-5Q5CY 11.5
GTEX-WFON-2026-SM-4LVMW 11.2
GTEX-11EI6-2226-SM-5EGJM 11.1
GTEX-11GS4-2026-SM-5N9CP 11.1
GTEX-14A6H-2326-SM-5Q5B5 11.0
GTEX-S95S-1126-SM-4B64E 10.8
GTEX-WH7G-1926-SM-4LVMM 10.8
GTEX-TKQ2-1526-SM-4DXUN 10.7
GTEX-WFG8-1926-SM-4LVM1 10.7
GTEX-OOBJ-2126-SM-3NB1N 10.4
GTEX-XPVG-2226-SM-4B65U 10.4
GTEX-P4QS-2126-SM-3NMCF 10.3
GTEX-XLM4-1526-SM-4AT6D 10.3
GTEX-13O21-1226-SM-5J2MK 10.1
GTEX-S4Q7-1226-SM-4AD5I 10.1
GTEX-11EQ8-1426-SM-5EGJR 10.0
GTEX-12WSI-2126-SM-5GCMV 10.0
GTEX-13N2G-0126-SM-5N9DV 10.0
GTEX-147JS-0126-SM-5S2TW 10.0
GTEX-R55D-0126-SM-48FEL 9.9
GTEX-YEC4-1526-SM-4W1YU 9.9
GTEX-OHPM-2126-SM-3LK75 9.8
GTEX-Y9LG-1726-SM-4VBQE 9.7
GTEX-ZAB5-2426-SM-5CVMW 9.6
GTEX-ZVTK-0126-SM-57WDG 9.4
GTEX-1339X-1926-SM-5PNVP 9.3
GTEX-ZDYS-1326-SM-5IJFF 9.3
GTEX-11P7K-1026-SM-5HL6Y 9.1
GTEX-13N1W-2626-SM-5IJEP 9.1
GTEX-SUCS-1326-SM-4DM5T 9.1
GTEX-13NYB-2226-SM-5MR58 9.0
GTEX-12WSL-2326-SM-5DUXQ 8.9
GTEX-XPT6-1626-SM-4B655 8.9
GTEX-139TT-2226-SM-5LZWO 8.8
GTEX-144GL-0726-SM-5LU4P 8.8
GTEX-TKQ1-0926-SM-4DXU2 8.8
GTEX-R55C-1426-SM-48FED 8.7
GTEX-XAJ8-1326-SM-47JYT 8.7
GTEX-11NUK-2626-SM-5A5MB 8.6
GTEX-ZDTT-2026-SM-5K7TY 8.6
GTEX-139TS-1726-SM-5IJG5 8.3
GTEX-13111-1526-SM-5EGJX 8.2
GTEX-QLQ7-1426-SM-4R1JX 8.2
GTEX-YJ89-0626-SM-4TT3Z 8.2
GTEX-U4B1-1526-SM-4DXSL 8.1
GTEX-145MO-0126-SM-5S2QU 8.0
GTEX-111CU-1726-SM-5EGHM 7.9
GTEX-N7MS-0126-SM-3TW8O 7.9
GTEX-YF7O-2026-SM-4W1YE 7.8
GTEX-NFK9-0126-SM-3LK5H 7.7
GTEX-QLQW-1026-SM-447A9 7.7
GTEX-13OW5-2526-SM-5L3I1 7.6
GTEX-147F4-0626-SM-5LUAK 7.6
GTEX-U3ZH-1526-SM-4DXV1 7.6
GTEX-U3ZM-1626-SM-4DXSK 7.6
GTEX-XMK1-2026-SM-4B65K 7.6
GTEX-ZV7C-2026-SM-5NQ8F 7.4
GTEX-11TUW-2226-SM-5EQL9 7.3
GTEX-13NZB-2026-SM-5MR4M 7.3
GTEX-WVLH-2626-SM-4MVNV 7.3
GTEX-117XS-2026-SM-5GID1 7.2
GTEX-T8EM-0126-SM-4DM5R 7.2
GTEX-OIZI-0126-SM-3NB13 7.1
GTEX-WHSB-2126-SM-4M1XF 7.0
GTEX-13FTW-1326-SM-5LZZD 6.9
GTEX-11WQC-2326-SM-5EQKE 6.8
GTEX-13OVL-0426-SM-5IFG6 6.8
GTEX-ZQUD-2026-SM-51MSM 6.7
GTEX-11EQ9-1926-SM-5PNVV 6.6
GTEX-1212Z-0326-SM-5FQSJ 6.5
GTEX-13112-0226-SM-5P9IV 6.5
GTEX-O5YT-2126-SM-3MJGD 6.5
GTEX-U8XE-0126-SM-4E3I3 6.5
GTEX-131XE-0426-SM-5IJF4 6.4
GTEX-ZZ64-1126-SM-5GZXY 6.4
GTEX-11O72-0726-SM-5P9GO 6.3
GTEX-SNMC-1026-SM-4DM7K 6.3
GTEX-Y5V6-1726-SM-4VDSZ 6.3
GTEX-ZT9W-2226-SM-57WFU 6.3
GTEX-111FC-1926-SM-5GZYC 6.2
GTEX-SNOS-1126-SM-4DM67 6.2
GTEX-ZPU1-2126-SM-57WED 6.1
GTEX-117YW-1526-SM-5EGGP 6.0
GTEX-11DXZ-2126-SM-59881 6.0
GTEX-13VXU-0726-SM-5J2O7 6.0
GTEX-Q2AH-1526-SM-48TZG 6.0
GTEX-Q2AI-1226-SM-48U14 6.0
GTEX-139T6-1226-SM-5IFFC 5.9
GTEX-11NV4-1726-SM-5N9FC 5.8
GTEX-XGQ4-2026-SM-4AT6G 5.8
GTEX-13NZA-2526-SM-5IJFX 5.7
GTEX-144GM-0426-SM-5Q5C8 5.7
GTEX-13O61-2026-SM-5J2M6 5.6
GTEX-11OF3-1826-SM-5987N 5.5
GTEX-OXRL-2126-SM-3NM98 5.4
GTEX-RN64-2326-SM-48FDW 5.4
GTEX-11TT1-2226-SM-5GU6B 5.3
GTEX-12C56-1426-SM-5FQSW 5.3
GTEX-QV31-1126-SM-4R1K4 5.3
GTEX-UPJH-0126-SM-4IHLL 5.3
GTEX-12ZZY-0126-SM-5LZV2 5.2
GTEX-RUSQ-2126-SM-47JXK 5.2
GTEX-QEG4-0126-SM-48TZE 5.1
GTEX-S7PM-0626-SM-4AD4Q 5.1
GTEX-WK11-0326-SM-4OOS6 5.0
GTEX-Z93S-1726-SM-5HL8G 4.9
GTEX-ZTSS-1526-SM-51MTC 4.9
GTEX-YEC3-1726-SM-5IFIK 4.8
GTEX-ZTX8-1126-SM-51MRM 4.8
GTEX-T5JC-0726-SM-4DM55 4.7
GTEX-XBEC-0126-SM-4GIDT 4.7
GTEX-11P82-1526-SM-5BC5M 4.6
GTEX-13FHP-2826-SM-5IJFW 4.6
GTEX-RM2N-1326-SM-48FCW 4.6
GTEX-X5EB-2026-SM-4E3KA 4.6
GTEX-ZYT6-2726-SM-5GICP 4.6
GTEX-111YS-2026-SM-5EGGL 4.5
GTEX-14ABY-0626-SM-5Q5C9 4.5
GTEX-ZA64-1626-SM-5CVME 4.4
GTEX-111VG-1926-SM-5GIDO 4.3
GTEX-RWSA-2426-SM-47JXR 4.3
GTEX-X261-2326-SM-4PQYU 4.3
GTEX-ZUA1-2726-SM-59HLJ 4.3
GTEX-11LCK-2326-SM-5HL53 4.2
GTEX-S3XE-1526-SM-4AD5A 4.1
GTEX-145MH-2326-SM-5O9AW 4.0
GTEX-S7SE-0326-SM-4AT5Q 4.0
GTEX-P4QR-0226-SM-3NMCH 3.9
GTEX-U8T8-1126-SM-4DXUE 3.7
GTEX-WZTO-0326-SM-4PQYZ 3.7
GTEX-XBED-2026-SM-4AT5D 3.6
GTEX-13O1R-0726-SM-5IJEI 3.5
GTEX-XQ3S-2726-SM-4BOP2 3.2
GTEX-Y111-2426-SM-4TT23 3.2
GTEX-T6MN-2026-SM-4DM7L 3.1
GTEX-QEG5-0126-SM-4R1JR 3.0
GTEX-R55E-0726-SM-48FCZ 2.8
GTEX-12WSH-0326-SM-5GCNH 2.7
GTEX-13FLW-2126-SM-5N9FD 2.7
GTEX-11ZUS-2726-SM-5FQUA 2.5
GTEX-OOBK-2126-SM-3LK5T 2.5
GTEX-12696-0226-SM-5EGL3 2.3
GTEX-WOFM-1126-SM-4OOSB 2.0
GTEX-11WQK-2826-SM-5EQKH 1.9
GTEX-REY6-0126-SM-48FDT 1.3
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

47.4

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 47.4
FF:10026-101D8 34,53,86 years, male 79.0
FF:10096-102C6 14-64 years, male 15.7

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