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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:117.2TPM
GTEx:38.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA043376

 

Antibody HPA050548

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

High   High  

Neuropil

Low   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

117.2

N/A Male, age 5
Sample 1
TPM: 149.0
overview Female, age 40
Sample 2
TPM: 81.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 121.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

38.7

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 31.5
Samples: 114

Max RPKM: 69.4
Min RPKM: 11.6
Std RPKM: 10.2
Median RPKM: 30.6
GTEX-PVOW-2526-SM-2XCF7 69.4
GTEX-UTHO-3026-SM-3GAFB 60.7
GTEX-QMR6-1426-SM-32PLA 55.4
GTEX-13FHO-3026-SM-5J1O9 51.8
GTEX-Y8DK-0826-SM-4TT3T 51.1
GTEX-11O72-2926-SM-5BC4V 48.3
GTEX-TSE9-3026-SM-3DB76 46.6
GTEX-WVLH-3026-SM-3MJG9 45.9
GTEX-WZTO-2926-SM-3NM9I 45.7
GTEX-WWYW-3126-SM-3NB39 44.8
GTEX-ZAK1-3026-SM-5S2MJ 44.0
GTEX-T2IS-3026-SM-32QPM 43.8
GTEX-RNOR-2326-SM-2TF4I 43.4
GTEX-13NYC-2826-SM-5K7WR 42.8
GTEX-14ASI-3026-SM-5S2PN 42.1
GTEX-Z93S-2926-SM-57WB9 42.0
GTEX-14BMV-3026-SM-5S2PQ 41.5
GTEX-11DXY-3226-SM-5GIDE 41.4
GTEX-T5JC-2426-SM-3NMDB 41.4
GTEX-13OW6-3026-SM-5J2MI 41.0
GTEX-145LS-3126-SM-5Q5BY 40.3
GTEX-WL46-2926-SM-3LK82 40.1
GTEX-131YS-3126-SM-5KLYT 40.0
GTEX-145MH-3026-SM-5Q5DZ 40.0
GTEX-X4XX-3026-SM-3NMB2 39.7
GTEX-X585-3026-SM-46MWF 39.6
GTEX-YFC4-3126-SM-5PNV6 39.5
GTEX-13PL6-3126-SM-5LUAR 38.9
GTEX-13OVH-3026-SM-5MR4N 38.8
GTEX-12ZZX-2926-SM-5GCOQ 38.3
GTEX-XLM4-3026-SM-4AT6L 38.2
GTEX-13X6J-3026-SM-5Q5CU 37.5
GTEX-13VXU-2926-SM-5LU5C 37.3
GTEX-ZUA1-3026-SM-59HJC 37.2
GTEX-12ZZZ-3026-SM-5BC67 37.0
GTEX-T6MN-2626-SM-32PMQ 36.2
GTEX-11PRG-2926-SM-5987A 35.8
GTEX-145MG-3026-SM-5RQJA 35.4
GTEX-117XS-3026-SM-5N9CA 35.3
GTEX-11NUK-2926-SM-5A5MD 35.3
GTEX-WHSE-3026-SM-3P5ZH 34.9
GTEX-111FC-3126-SM-5GZZ2 34.8
GTEX-QDT8-2926-SM-32PKC 34.8
GTEX-1313W-3126-SM-5LZUI 34.1
GTEX-13O3O-3126-SM-5KM3H 33.8
GTEX-ZYFD-3026-SM-5E44C 33.4
GTEX-13NYS-3126-SM-5KLYV 32.9
GTEX-13O3Q-2926-SM-5KM45 32.8
GTEX-1399T-3026-SM-5KLZC 32.6
GTEX-11WQK-3026-SM-5EQL6 32.2
GTEX-144GL-3026-SM-5Q5CW 31.8
GTEX-ZVT3-3026-SM-5E43N 31.7
GTEX-13SLX-3126-SM-5S2Q5 31.5
GTEX-RU72-3026-SM-5SI7Y 31.3
GTEX-1128S-2726-SM-5H12C 31.2
GTEX-13FXS-3126-SM-5J2NN 30.7
GTEX-ZE7O-3126-SM-5HL5X 30.6
GTEX-11ZUS-2926-SM-5FQSL 30.5
GTEX-11DXW-1126-SM-5H12Q 30.2
GTEX-QVUS-2826-SM-3GADB 30.1
GTEX-132Q8-3026-SM-5PNVG 29.9
GTEX-QVJO-1426-SM-2S1QY 29.9
GTEX-12WSH-3026-SM-5CVNI 29.8
GTEX-11GSO-2926-SM-5HL73 29.6
GTEX-12WSC-3026-SM-5GCNF 29.4
GTEX-14A5I-2926-SM-5Q5CQ 29.1
GTEX-R55F-1326-SM-5S2V4 28.9
GTEX-YJ89-3026-SM-5IFJI 28.8
GTEX-13FLW-1426-SM-5K7YE 28.7
GTEX-12126-1026-SM-5P9JJ 28.4
GTEX-13QIC-2926-SM-5J2NF 27.9
GTEX-Y111-2726-SM-4TT3N 27.9
GTEX-13NYB-3026-SM-5IJD7 27.7
GTEX-11OC5-0726-SM-5P9JK 27.4
GTEX-XOTO-3026-SM-4B65M 27.2
GTEX-13X6K-2926-SM-5Q5D5 27.1
GTEX-11EI6-3026-SM-5GZZO 26.9
GTEX-13FHP-3026-SM-5IJBS 26.1
GTEX-145MF-2726-SM-5O995 25.7
GTEX-11EMC-3226-SM-5EGKW 25.4
GTEX-12ZZY-3026-SM-5GCOU 24.9
GTEX-12ZZW-2926-SM-5LZUP 24.3
GTEX-OXRN-2426-SM-2I5EQ 24.1
GTEX-13OW8-2826-SM-5L3GC 23.9
GTEX-13S7M-3126-SM-5RQJQ 23.7
GTEX-1192X-3126-SM-5N9BY 22.9
GTEX-13OW7-3026-SM-5L3GY 22.3
GTEX-NPJ8-1526-SM-2D7VU 22.1
GTEX-ZAJG-3126-SM-5HL9J 22.1
GTEX-ZZPT-3026-SM-5GZXH 21.8
GTEX-NPJ7-2726-SM-2I3FT 21.7
GTEX-11ONC-2926-SM-5P9JM 21.6
GTEX-13OVJ-2826-SM-5L3GW 21.6
GTEX-13JVG-3126-SM-5L3FH 21.5
GTEX-Q2AG-2926-SM-2HMJ3 21.4
GTEX-11TTK-2926-SM-5PNYP 21.2
GTEX-11NV4-2126-SM-5N9DS 21.0
GTEX-131XW-3126-SM-5LZUC 20.6
GTEX-N7MT-1126-SM-5SI7V 20.2
GTEX-12WSD-3126-SM-5HL7P 20.1
GTEX-139T8-1026-SM-5J2MC 20.0
GTEX-13JUV-2926-SM-5LZX7 19.5
GTEX-13PVQ-3026-SM-5SI93 19.1
GTEX-11GS4-3126-SM-5A5LH 18.9
GTEX-13IVO-2926-SM-5L3CZ 18.4
GTEX-11OF3-2926-SM-5HL78 17.8
GTEX-147GR-3026-SM-5S2ML 17.8
GTEX-1117F-3226-SM-5N9CT 17.3
GTEX-PWO3-0926-SM-2I5EY 16.9
GTEX-11GSP-3226-SM-5986O 16.1
GTEX-144FL-3026-SM-5O99C 15.6
GTEX-13G51-3026-SM-5IJB8 14.5
GTEX-1445S-3026-SM-5O9BR 14.2
GTEX-12WSA-2926-SM-5EQ4D 11.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 46.3
Samples: 108

Max RPKM: 89.2
Min RPKM: 13.7
Std RPKM: 16.6
Median RPKM: 48.8
GTEX-T6MN-0011-R10A-SM-32QP7 89.2
GTEX-QDT8-0011-R10A-SM-32PKG 86.1
GTEX-QMR6-0011-R10A-SM-32PKO 79.7
GTEX-X585-0011-R10A-SM-46MUY 75.1
GTEX-WL46-0011-R10A-SM-3MJFQ 73.1
GTEX-S7SE-0011-R10A-SM-2XCDF 71.8
GTEX-WVLH-0011-R10A-SM-3MJFM 70.8
GTEX-WWYW-0011-R10A-SM-3NB35 70.4
GTEX-12WSC-0011-R10a-SM-5GU57 69.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 68.0
GTEX-145MH-0011-R10b-SM-5PNUK 67.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 66.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 65.9
GTEX-QVUS-0011-R10A-SM-3GIK3 64.8
GTEX-13X6J-0011-R10b-SM-5PNWA 64.1
GTEX-12WSE-0011-R10b-SM-5P9JV 63.3
GTEX-13O3Q-0011-R10b-SM-5KM39 62.3
GTEX-1313W-0011-R10b-SM-5DUXA 61.7
GTEX-YFC4-0011-R10a-SM-4SOK5 60.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 59.9
GTEX-13FXS-0011-R10a-SM-5J2MA 58.4
GTEX-145MG-0011-R10a-SM-5PNWG 58.0
GTEX-T5JC-0011-R10A-SM-32PM2 58.0
GTEX-131YS-0011-R10b-SM-5EQ5N 57.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 57.8
GTEX-P44H-0011-R10A-SM-2XCEK 57.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 57.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 57.0
GTEX-11H98-0011-R10b-SM-5NQ98 56.4
GTEX-YJ89-0011-R10a-SM-4SOK9 56.0
GTEX-13NYB-0011-R10a-SM-5KM43 55.6
GTEX-NL3H-0011-R10A-SM-2I3E9 55.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 55.3
GTEX-131XH-0011-R10a-SM-5EGLJ 55.3
GTEX-14BIN-0011-R10a-SM-5S2UA 55.0
GTEX-12WSF-0011-R10a-SM-5LZVH 54.5
GTEX-ZUA1-0011-R10a-SM-51MT6 54.5
GTEX-N7MS-0011-R10A-SM-2HMJK 54.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 53.8
GTEX-13SLX-0011-R10a-SM-5P9HV 53.3
GTEX-WZTO-0011-R10B-SM-4E3KB 52.2
GTEX-13O3O-0011-R10a-SM-5LUA9 51.4
GTEX-13QIC-0011-R10a-SM-5O9C7 51.4
GTEX-XLM4-0011-R10A-SM-4AT5P 51.2
GTEX-TSE9-0011-R10A-SM-3DB7O 51.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 50.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 50.8
GTEX-Z93S-0011-R10a-SM-4RGNM 50.8
GTEX-X4XX-0011-R10B-SM-46MWO 50.0
GTEX-13FHO-0011-R10b-SM-5J2MM 49.7
GTEX-X4EP-0011-R10B-SM-4QASJ 49.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 49.6
GTEX-13X6K-0011-R10a-SM-5P9JR 49.4
GTEX-13G51-0011-R10b-SM-5LZYF 49.2
GTEX-13OW7-0011-R10a-SM-5L3H3 48.4
GTEX-13X6I-0011-R10a-SM-5PNWI 47.7
GTEX-13CZV-0011-R10b-SM-5LZYD 46.9
GTEX-147GR-0011-R10b-SM-5S2UM 46.5
GTEX-12WSH-0011-R10a-SM-5LZUS 46.0
GTEX-12126-0011-R10b-SM-5BC6T 45.7
GTEX-145LS-0011-R10a-SM-5PNUQ 45.7
GTEX-13S7M-0011-R10b-SM-5PNZB 45.0
GTEX-N7MT-0011-R10A-SM-2I3E1 44.4
GTEX-13N1W-0011-R10b-SM-5MR4H 44.2
GTEX-13OW6-0011-R10a-SM-5L3HE 43.5
GTEX-11WQK-0011-R10a-SM-5BC6R 42.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 42.4
GTEX-13NYS-0011-R10a-SM-5MR4S 42.0
GTEX-ZF28-0011-R10a-SM-4WWEH 42.0
GTEX-12WSM-0011-R10a-SM-5DUWV 41.8
GTEX-ZVT3-0011-R10b-SM-57WB6 41.7
GTEX-13FLW-0011-R10b-SM-5LZZF 41.3
GTEX-13OVL-0011-R10a-SM-5L3GS 41.2
GTEX-13OW8-0011-R10a-SM-5L3H6 40.3
GTEX-14BIL-0011-R10a-SM-5SI75 39.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 39.3
GTEX-11ZUS-0011-R10b-SM-5BC79 38.3
GTEX-13JUV-0011-R10b-SM-5LZXR 36.9
GTEX-147F4-0011-R10b-SM-5S2WC 36.2
GTEX-139TS-0011-R10a-SM-5K7TU 36.1
GTEX-12WSD-0011-R10b-SM-5GU79 35.2
GTEX-13N2G-0011-R10a-SM-5MR34 34.8
GTEX-OXRN-0011-R10A-SM-2I5GC 34.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 34.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 32.3
GTEX-13QJC-0011-R10a-SM-5SI63 32.3
GTEX-145LU-0011-R10a-SM-5PNWJ 31.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 31.0
GTEX-13SLW-0011-R10a-SM-5S2UI 27.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 26.4
GTEX-ZXG5-0011-R10a-SM-57WDD 25.9
GTEX-RVPU-0011-R10A-SM-2XCAH 25.3
GTEX-X261-0011-R10B-SM-4E3JT 24.8
GTEX-11WQC-0011-R10a-SM-57WCT 24.7
GTEX-13JVG-0011-R10b-SM-5KM2P 23.2
GTEX-NL4W-0011-R10A-SM-2I3DY 23.0
GTEX-13NZA-0011-R10b-SM-5KM54 21.1
GTEX-OXRO-0011-R10A-SM-2I5EH 21.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 20.6
GTEX-14753-0011-R10b-SM-5S2WE 19.1
GTEX-13IVO-0011-R10a-SM-5LZY3 19.0
GTEX-1477Z-0011-R10b-SM-5S2RF 18.9
GTEX-1445S-0011-R10a-SM-5PNWB 16.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 15.9
GTEX-XMD1-0011-R10A-SM-4AT4A 15.6
GTEX-12WSA-0011-R10b-SM-5P9ET 14.0
GTEX-131XW-0011-R10a-SM-5DUVA 13.7
GTEX-ZV68-0011-R10a-SM-51MT7 13.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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