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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:172.3TPM
GTEx:36.9RPKM
FANTOM5:217.1Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA043376

 

Antibody HPA050548

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

172.3

overview Male, age 65
Sample 1
TPM: 183.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 149.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 153.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 202.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

36.9

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 36.9
Samples: 88

Max RPKM: 76.7
Min RPKM: 13.6
Std RPKM: 15.6
Median RPKM: 34
GTEX-YEC4-1726-SM-4W21E 76.7
GTEX-1122O-1326-SM-5H11F 74.1
GTEX-ZPCL-1726-SM-57WEO 73.9
GTEX-13D11-0726-SM-5LZZB 69.7
GTEX-145LT-1026-SM-5LU9O 67.0
GTEX-Y9LG-1626-SM-5IFHM 63.4
GTEX-XGQ4-1326-SM-4GIDU 63.4
GTEX-ZLV1-1126-SM-4WWBW 60.6
GTEX-ZTSS-0926-SM-59865 60.2
GTEX-13PL7-2626-SM-5IFH4 59.3
GTEX-111YS-1426-SM-5GID8 58.8
GTEX-14DAR-1426-SM-5RQIR 58.3
GTEX-YB5E-1526-SM-5IFIE 57.8
GTEX-XXEK-1026-SM-4BRUW 57.1
GTEX-1399S-2026-SM-5KM4B 53.7
GTEX-ZZ64-0526-SM-5GZXM 52.6
GTEX-ZVZP-1826-SM-5GZXB 51.8
GTEX-11DXX-1626-SM-5H11H 50.5
GTEX-ZYWO-1526-SM-5SIAL 48.7
GTEX-ZTX8-0526-SM-59HLD 48.7
GTEX-13FTW-2026-SM-5IJE2 47.9
GTEX-11I78-1126-SM-5A5K5 46.9
GTEX-YF7O-1826-SM-5IFIU 45.9
GTEX-11EQ9-1326-SM-5985X 45.6
GTEX-11P82-0826-SM-5P9GU 45.5
GTEX-ZYFG-2026-SM-5E43Y 45.4
GTEX-ZXES-1526-SM-5NQ95 44.7
GTEX-131XF-1326-SM-5GCMQ 44.5
GTEX-14E6E-1626-SM-5RQI7 43.6
GTEX-X5EB-1626-SM-4E3IV 42.1
GTEX-ZPIC-2326-SM-57WDW 40.9
GTEX-133LE-1426-SM-5IFH1 40.0
GTEX-13113-1226-SM-5EGHT 39.7
GTEX-XUZC-1426-SM-4BRV3 39.6
GTEX-ZVP2-1726-SM-5GU5P 39.3
GTEX-ZLFU-1526-SM-4WWBT 38.0
GTEX-VJYA-0926-SM-4KL1N 37.6
GTEX-WFJO-0926-SM-4LVM2 37.4
GTEX-ZA64-1226-SM-5HL7B 37.3
GTEX-XBED-1426-SM-4AT4G 36.8
GTEX-ZTPG-2626-SM-57WFX 36.6
GTEX-11P7K-1626-SM-5GU63 35.9
GTEX-ZVT2-2126-SM-5NQ93 35.5
GTEX-11DXZ-1326-SM-5H11X 34.9
GTEX-13FH7-1226-SM-5IJFK 33.2
GTEX-XAJ8-0526-SM-47JYK 32.8
GTEX-1399U-2126-SM-5IFEZ 32.6
GTEX-13O61-1326-SM-5KM31 32.4
GTEX-Y114-1426-SM-4TT6W 32.4
GTEX-13CF3-1226-SM-5LZXN 32.2
GTEX-139T6-1026-SM-5IJGC 31.7
GTEX-13O21-1026-SM-5IJDU 29.8
GTEX-ZEX8-1826-SM-57WBH 29.7
GTEX-139YR-2226-SM-5IFFW 29.3
GTEX-11NSD-1726-SM-5N9C3 28.6
GTEX-WQUQ-2426-SM-4MVNW 28.1
GTEX-12BJ1-1926-SM-5HL9Z 28.1
GTEX-11XUK-1426-SM-5EQMG 28.0
GTEX-WH7G-1626-SM-4LVMY 27.0
GTEX-148VJ-2226-SM-5NQ9M 26.9
GTEX-WRHK-1026-SM-4MVOD 26.6
GTEX-11VI4-1626-SM-5EQKO 26.6
GTEX-13RTK-0826-SM-5Q5C6 26.1
GTEX-Z9EW-0926-SM-5CVMM 25.5
GTEX-1399R-2026-SM-5K7WN 25.5
GTEX-WFG7-1726-SM-4LVME 25.2
GTEX-Y3IK-1726-SM-4YCCR 24.6
GTEX-1192X-2526-SM-59868 24.4
GTEX-145ME-0926-SM-5O9AR 23.8
GTEX-ZP4G-1626-SM-57WGD 22.5
GTEX-WFG8-1626-SM-4LVMB 21.9
GTEX-X15G-1426-SM-4PQZK 20.5
GTEX-131XG-1726-SM-5LZUR 20.4
GTEX-ZC5H-2326-SM-4WAYT 20.3
GTEX-13QBU-1926-SM-5IJEW 20.2
GTEX-UPK5-2026-SM-4JBIM 20.1
GTEX-12WSK-1526-SM-5CVNO 19.0
GTEX-VUSG-1726-SM-4KKZL 18.7
GTEX-ZF2S-1726-SM-57WFT 18.6
GTEX-Y5LM-1626-SM-4VDTB 18.1
GTEX-ZQG8-2526-SM-57WEQ 17.8
GTEX-13OVI-1926-SM-5IJCG 17.7
GTEX-ZQUD-0926-SM-57WE3 16.9
GTEX-111CU-1326-SM-5NQ8L 16.9
GTEX-WEY5-1526-SM-4LMJF 16.7
GTEX-13111-1426-SM-5DUW3 15.9
GTEX-117YX-0326-SM-5GICL 15.4
GTEX-XMK1-1826-SM-4B66F 13.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

217.1

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 217.1
FF:10024-101D6 15,40,85 years, mixed 217.1

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