We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
FAM3C
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:64.5TPM
GTEx:21.0RPKM
FANTOM5:31.0Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Low
 

Antibody staining

Antibody HPA043376

 

Antibody HPA050548

 

Cells in red pulp

Medium   Not detected  

Cells in white pulp

Low   Not detected  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

64.5

overview Female, age 60
Sample 1
TPM: 61.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 51.1
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 60.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 51.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 97.6
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

21.0

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 21.0
Samples: 104

Max RPKM: 36.3
Min RPKM: 11.8
Std RPKM: 4.1
Median RPKM: 20.4
GTEX-Y114-0726-SM-4TT6U 36.3
GTEX-ZYWO-0226-SM-5GZX3 30.7
GTEX-132QS-0226-SM-5IFFZ 30.2
GTEX-XMK1-0126-SM-4B65F 29.0
GTEX-YB5K-1926-SM-4VDT4 29.0
GTEX-11XUK-0426-SM-5EQML 28.6
GTEX-ZAB5-0526-SM-5CVMU 28.3
GTEX-131XG-0426-SM-5IFGD 28.1
GTEX-XV7Q-0126-SM-4BRVK 26.8
GTEX-W5WG-0626-SM-4SOID 26.0
GTEX-QDVN-0526-SM-48TZ4 25.6
GTEX-11P7K-0426-SM-5BC5H 25.5
GTEX-Y5LM-0326-SM-4VBRN 25.4
GTEX-13N11-0126-SM-5KM2Z 25.2
GTEX-QCQG-0226-SM-48U28 25.1
GTEX-ZPU1-1026-SM-4YCEQ 25.1
GTEX-11VI4-0126-SM-5GU6Z 24.6
GTEX-12WSG-0926-SM-5EGIH 24.5
GTEX-11P81-1326-SM-5GU5S 24.3
GTEX-1399S-0226-SM-5IFFG 24.3
GTEX-146FR-1926-SM-5NQA6 24.2
GTEX-139YR-0426-SM-5IFFV 23.9
GTEX-X4LF-0226-SM-4QAS8 23.8
GTEX-13CF3-0226-SM-5J1NW 23.7
GTEX-13FH7-1326-SM-5IFG8 23.3
GTEX-13S86-0126-SM-5S2PI 23.3
GTEX-Q2AH-0226-SM-48U1I 23.3
GTEX-WFON-0126-SM-4LVM9 23.3
GTEX-ZLFU-0526-SM-4WWBN 23.3
GTEX-147F3-0126-SM-5NQBJ 23.2
GTEX-YB5E-0426-SM-5IFHR 23.2
GTEX-X585-1826-SM-4QAS3 23.1
GTEX-YFCO-0926-SM-5LUA5 23.1
GTEX-R55G-0226-SM-48FEI 22.8
GTEX-11NSD-0426-SM-5N9CR 22.7
GTEX-ZDTT-1026-SM-5KM19 22.6
GTEX-ZVP2-0526-SM-51MSC 22.5
GTEX-WHWD-0126-SM-4OORS 22.4
GTEX-Q734-0226-SM-48U1A 22.3
GTEX-RUSQ-0126-SM-47JWV 22.3
GTEX-13U4I-1626-SM-5IFFR 22.2
GTEX-145MN-0126-SM-5RQHY 22.1
GTEX-1399R-0226-SM-5IJGG 21.8
GTEX-14DAR-0326-SM-5S2PS 21.7
GTEX-117YX-2126-SM-5GIEL 21.6
GTEX-Y8LW-0126-SM-4VBS1 21.4
GTEX-144GN-2126-SM-5O99D 21.3
GTEX-1122O-0526-SM-5N9DM 21.1
GTEX-OOBJ-0926-SM-48TDO 20.9
GTEX-ZP4G-0326-SM-4YCEF 20.9
GTEX-13111-0126-SM-5EGHO 20.5
GTEX-131XE-1126-SM-5EGHW 20.5
GTEX-1211K-0426-SM-5FQTP 20.3
GTEX-S3XE-0626-SM-4AD6B 20.0
GTEX-XGQ4-0126-SM-4AT4H 20.0
GTEX-13PVR-0326-SM-5RQJY 19.9
GTEX-ZYFG-0726-SM-5GIDX 19.9
GTEX-PW2O-0126-SM-48TC8 19.8
GTEX-U3ZH-0126-SM-4DXUK 19.8
GTEX-13VXT-1326-SM-5LU3Y 19.7
GTEX-YEC4-0126-SM-4W21T 19.7
GTEX-ZLWG-0426-SM-4WWFA 19.7
GTEX-ZZPU-0126-SM-5E446 19.7
GTEX-139T6-0226-SM-5IFGZ 19.5
GTEX-P4PP-0926-SM-48TBZ 19.3
GTEX-QV44-0126-SM-4R1KH 19.2
GTEX-XPVG-0626-SM-4B65B 19.2
GTEX-QV31-0126-SM-447BP 19.1
GTEX-QMRM-0226-SM-4R1K7 19.0
GTEX-U3ZN-0126-SM-4DXUM 19.0
GTEX-UJHI-0126-SM-4IHLP 19.0
GTEX-12BJ1-0726-SM-5EGGF 18.9
GTEX-ZVZP-0726-SM-59HKA 18.8
GTEX-P4QS-0926-SM-48TBS 18.7
GTEX-13PL7-1126-SM-5MR5O 18.5
GTEX-VJYA-0126-SM-4KL1P 18.5
GTEX-T5JW-0126-SM-4DM6K 18.4
GTEX-11DXX-0726-SM-5H12X 18.2
GTEX-12WSK-0126-SM-5GCO7 18.2
GTEX-XXEK-0126-SM-4BRVU 18.0
GTEX-146FQ-0626-SM-5LU9U 17.8
GTEX-U4B1-0526-SM-4DXTK 17.8
GTEX-O5YT-0926-SM-48TDG 17.4
GTEX-OIZH-0926-SM-48TBR 17.3
GTEX-PLZ6-0126-SM-48TC6 17.3
GTEX-XAJ8-0126-SM-47JYG 17.1
GTEX-XUJ4-0226-SM-4BOP8 16.8
GTEX-PX3G-0926-SM-48U12 16.7
GTEX-Y3IK-0126-SM-4WWE9 16.7
GTEX-ZV6S-0826-SM-5NQ6Z 16.7
GTEX-QLQW-0126-SM-447BK 16.5
GTEX-13X6H-0726-SM-5Q5BX 16.4
GTEX-S4Z8-0226-SM-4AD5K 16.3
GTEX-UPK5-1626-SM-4JBHI 16.2
GTEX-X3Y1-0126-SM-4PQZA 16.1
GTEX-12WSN-0126-SM-5DUX5 15.9
GTEX-Z9EW-0726-SM-5HL9H 15.5
GTEX-14E6E-1226-SM-5S2R5 15.4
GTEX-POMQ-0126-SM-48TD6 15.3
GTEX-11EQ9-0426-SM-5A5JY 15.0
GTEX-Y3I4-0126-SM-4TT26 14.6
GTEX-11LCK-0126-SM-5A5M5 14.2
GTEX-12WSJ-0526-SM-5GCOZ 12.1
GTEX-XQ8I-1726-SM-4BOQB 11.8
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

31.0

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 31.0
FF:10025-101D7 39,50,70 years, male 31.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.