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ZNF580

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:25.4TPM
GTEx:16.5RPKM
FANTOM5:51.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA054058

  

Chondrocytes

 Not detected  

Fibroblasts

 Medium  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:High
Peripheral nerve:Low
 

Antibody staining

Antibody HPA054058

  

Adipocytes

 Not detected  

Fibroblasts

 High  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

25.4
N/A Female, age 80
Sample 1
TPM: 43.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 24.0
N/A Female, age 57
Sample 3
TPM: 31.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 16.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 10.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

16.5

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 16.9
Samples: 350

Max RPKM: 31.8
Min RPKM: 4.5
Std RPKM: 4.2
Median RPKM: 16.7
GTEX-XGQ4-2226-SM-4AT4Y 31.8
GTEX-11EMC-2826-SM-5PNY6 31.3
GTEX-Y8E5-0226-SM-57WCM 30.9
GTEX-145MN-2626-SM-5NQAH 30.3
GTEX-YB5E-2126-SM-5IFI7 29.1
GTEX-Z93T-0226-SM-5HL5Z 28.4
GTEX-ZUA1-0226-SM-5NQ9Q 26.9
GTEX-W5WG-2526-SM-4SOJ2 26.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 15.9
Samples: 227

Max RPKM: 37.8
Min RPKM: 7.4
Std RPKM: 4.2
Median RPKM: 15.3
GTEX-1122O-0926-SM-5N9C9 37.8
GTEX-14A6H-1026-SM-5SIAZ 28.7
GTEX-11GS4-1026-SM-5N9DE 28.1
GTEX-11DXX-2026-SM-5EGJL 26.3
GTEX-13O3Q-1126-SM-5K7YK 26.1
GTEX-13O3P-0926-SM-5IFFI 25.8
GTEX-ZDXO-2326-SM-5LU9W 25.6
GTEX-13G51-0526-SM-5IJCQ 25.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

51.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 51.0
FF:10010-101C1 65,65,76 years, mixed 51.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.