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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:23.1RPKM
FANTOM5:54.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA046841

 

Antibody HPA052867

 

Antibody CAB009746

 

Glial cells

Not detected   Not detected   Medium  

Neuronal cells

Low   Medium   High  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

23.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 23.1
Samples: 117

Max RPKM: 36
Min RPKM: 8.8
Std RPKM: 5.5
Median RPKM: 23.7
GTEX-11H98-0011-R5b-SM-57WCF 36.0
GTEX-131YS-0011-R5b-SM-5K7YB 34.2
GTEX-13X6K-0011-R5b-SM-5PNUE 33.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 31.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 31.6
GTEX-132Q8-0011-R5a-SM-5IJDM 31.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 31.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 30.8
GTEX-13G51-0011-R5a-SM-5L3EB 30.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 30.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 30.4
GTEX-1399T-0011-R5b-SM-5IJDK 30.1
GTEX-N7MT-0011-R5a-SM-2I3G6 30.1
GTEX-X585-0011-R5A-SM-46MVI 30.1
GTEX-13JUV-0011-R5a-SM-5LZY5 29.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 29.3
GTEX-WWYW-0011-R5A-SM-3NB3E 29.0
GTEX-QVJO-0011-R5A-SM-2S1QM 28.5
GTEX-13X6I-0011-R5a-SM-5PNWW 28.4
GTEX-145LS-0011-R5a-SM-5SI65 28.4
GTEX-XMD1-0011-R5A-SM-4AT47 28.2
GTEX-ZUA1-0011-R5b-SM-51MTG 28.2
GTEX-12WSF-0011-R5a-SM-5HL8K 27.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 27.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 27.9
GTEX-11GSP-0011-R5a-SM-57WBE 27.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 27.7
GTEX-13NYS-0011-R5a-SM-5MR4D 27.6
GTEX-14BIM-0011-R5b-SM-5S2RM 27.3
GTEX-T6MN-0011-R5A-SM-32QPD 27.2
GTEX-WZTO-0011-R5B-SM-3NMC5 27.2
GTEX-S7SE-0011-R5A-SM-2XCDA 26.9
GTEX-N7MS-0011-R5a-SM-2HMK8 26.7
GTEX-13JVG-0011-R5a-SM-5MR4O 26.4
GTEX-145MH-0011-R5a-SM-5P9JT 26.4
GTEX-OHPN-0011-R5A-SM-2I5FF 26.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 26.3
GTEX-13OW6-0011-R5a-SM-5O9BK 26.3
GTEX-12WSB-0011-R5b-SM-5GU67 26.1
GTEX-139TT-0011-R5b-SM-5K7W8 26.0
GTEX-NL4W-0011-R5a-SM-2I3GD 25.9
GTEX-13VXU-0011-R5a-SM-5O9D7 25.8
GTEX-UTHO-0011-R5A-SM-3GIJD 25.7
GTEX-1313W-0011-R5b-SM-5L3EP 25.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 25.6
GTEX-14ABY-0011-R5b-SM-5SI7B 25.6
GTEX-P44H-0011-R5A-SM-2XCEX 25.6
GTEX-13SLX-0011-R5a-SM-5O9BV 25.4
GTEX-X261-0011-R5A-SM-3NMB4 25.1
GTEX-RU72-0011-R5A-SM-2TF6U 25.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 24.9
GTEX-T5JC-0011-R5A-SM-32PLK 24.8
GTEX-WVLH-0011-R5A-SM-3MJFW 24.8
GTEX-T2IS-0011-R5A-SM-32QP4 24.6
GTEX-RVPV-0011-R5A-SM-2TF69 24.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 24.2
GTEX-13OVL-0011-R5b-SM-5L3FU 24.0
GTEX-13X6J-0011-R5b-SM-5PNWT 23.8
GTEX-12WSC-0011-R5b-SM-5CVNS 23.7
GTEX-13FLV-0011-R5a-SM-5LZWT 23.6
GTEX-WL46-0011-R5A-SM-3LK6V 23.6
GTEX-13O3O-0011-R5b-SM-5KM44 23.5
GTEX-11OF3-0011-R5a-SM-57WB4 23.3
GTEX-13CZV-0011-R5a-SM-5K7XA 23.2
GTEX-13OVH-0011-R5b-SM-5KM4L 23.0
GTEX-13OW7-0011-R5b-SM-5O9DM 22.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 22.8
GTEX-12WSA-0011-R5b-SM-5GU5I 22.7
GTEX-13FXS-0011-R5b-SM-5LZYE 22.6
GTEX-R55E-0011-R5A-SM-2TC5N 22.3
GTEX-TSE9-0011-R5A-SM-3DB7J 21.9
GTEX-11NV4-0011-R5a-SM-5NQ88 21.6
GTEX-13OW5-0011-R5b-SM-5L3FR 21.4
GTEX-PVOW-0011-R5A-SM-32PL7 21.3
GTEX-13FLW-0011-R5a-SM-5LZX6 20.8
GTEX-13S7M-0011-R5b-SM-5P9HS 20.6
GTEX-12ZZX-0011-R5a-SM-5HL89 20.5
GTEX-139TS-0011-R5b-SM-5J2MZ 20.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 20.4
GTEX-139T8-0011-R5b-SM-5J1MO 20.1
GTEX-1445S-0011-R5a-SM-5PNUS 19.9
GTEX-RVPU-0011-R5A-SM-2XCAD 19.9
GTEX-144GO-0011-R5a-SM-5PNUR 19.8
GTEX-ZE7O-0011-R5a-SM-57WBO 19.8
GTEX-XOTO-0011-R5A-SM-4B657 19.7
GTEX-YFC4-0011-R5a-SM-4RGLR 19.7
GTEX-Z93S-0011-R5b-SM-4RGNI 19.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 19.5
GTEX-13NYB-0011-R5a-SM-5MR45 19.4
GTEX-12WSD-0011-R5b-SM-5CVNG 19.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 19.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 19.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 19.0
GTEX-ZXG5-0011-R5b-SM-57WBN 18.7
GTEX-NL3H-0011-R5a-SM-2I3GB 18.5
GTEX-14BIN-0011-R5b-SM-5SI78 18.4
GTEX-QMR6-0011-R5A-SM-32PKT 18.3
GTEX-ZV68-0011-R5a-SM-4YCDW 18.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 17.6
GTEX-13CIG-0011-R5b-SM-5L3F2 17.1
GTEX-X4XX-0011-R5A-SM-46MWN 17.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 16.4
GTEX-NPJ7-0011-R5a-SM-33HBK 16.0
GTEX-11WQC-0011-R5a-SM-5BC74 15.8
GTEX-144GL-0011-R5b-SM-5PNUJ 15.7
GTEX-ZVT3-0011-R5a-SM-51MSI 15.5
GTEX-13112-0011-R5b-SM-5DUV8 14.9
GTEX-OXRN-0011-R5A-SM-2I5EF 13.8
GTEX-11UD1-0011-R5b-SM-5P9FP 13.7
GTEX-1477Z-0011-R5b-SM-5PNUO 13.5
GTEX-S7PM-0011-R5A-SM-3NM8G 13.2
GTEX-13CF2-0011-R5a-SM-5LZWS 12.8
GTEX-YJ89-0011-R5a-SM-4V6GM 12.5
GTEX-12WSH-0011-R5b-SM-5P9F3 11.3
GTEX-13FHP-0011-R5b-SM-5LZY2 11.3
GTEX-13NZA-0011-R5b-SM-5KM4K 10.0
GTEX-145MG-0011-R5b-SM-5S2VU 8.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

54.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 54.6
FF:10164-103B2 76 years, female 66.5
FF:10379-105H1 89 years, female 42.7

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