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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:74.1TPM
GTEx:23.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA046841

 

Antibody HPA052867

 

Antibody CAB009746

 

Endothelial cells

Not detected   Not detected   Low  

Glial cells

Not detected   Not detected   Medium  

Neuronal cells

Low   Low   Medium  

Neuropil

Not detected   Not detected   Low  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

74.1

N/A Male, age 5
Sample 1
TPM: 72.6
overview Female, age 40
Sample 2
TPM: 61.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 88.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

23.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 23.6
Samples: 114

Max RPKM: 32.3
Min RPKM: 13.2
Std RPKM: 4
Median RPKM: 23.8
GTEX-WHSE-3026-SM-3P5ZH 32.3
GTEX-11ONC-2926-SM-5P9JM 31.9
GTEX-144FL-3026-SM-5O99C 31.7
GTEX-13FHO-3026-SM-5J1O9 30.7
GTEX-14BMV-3026-SM-5S2PQ 30.3
GTEX-145LS-3126-SM-5Q5BY 30.2
GTEX-ZYFD-3026-SM-5E44C 30.1
GTEX-12ZZX-2926-SM-5GCOQ 29.2
GTEX-13OW8-2826-SM-5L3GC 29.1
GTEX-13SLX-3126-SM-5S2Q5 29.1
GTEX-NPJ8-1526-SM-2D7VU 29.1
GTEX-WZTO-2926-SM-3NM9I 28.9
GTEX-13OVJ-2826-SM-5L3GW 28.6
GTEX-13VXU-2926-SM-5LU5C 28.4
GTEX-11NUK-2926-SM-5A5MD 28.3
GTEX-XOTO-3026-SM-4B65M 28.0
GTEX-13NYC-2826-SM-5K7WR 27.9
GTEX-T5JC-2426-SM-3NMDB 27.9
GTEX-11WQK-3026-SM-5EQL6 27.4
GTEX-13NYS-3126-SM-5KLYV 27.3
GTEX-13JVG-3126-SM-5L3FH 27.2
GTEX-117XS-3026-SM-5N9CA 27.1
GTEX-WWYW-3126-SM-3NB39 27.1
GTEX-YJ89-3026-SM-5IFJI 27.0
GTEX-132Q8-3026-SM-5PNVG 26.8
GTEX-QMR6-1426-SM-32PLA 26.8
GTEX-T6MN-2626-SM-32PMQ 26.7
GTEX-WVLH-3026-SM-3MJG9 26.7
GTEX-TSE9-3026-SM-3DB76 26.4
GTEX-RNOR-2326-SM-2TF4I 26.3
GTEX-ZUA1-3026-SM-59HJC 26.3
GTEX-131YS-3126-SM-5KLYT 26.2
GTEX-13OW6-3026-SM-5J2MI 26.2
GTEX-X585-3026-SM-46MWF 26.0
GTEX-11DXY-3226-SM-5GIDE 25.9
GTEX-11GSO-2926-SM-5HL73 25.8
GTEX-14A5I-2926-SM-5Q5CQ 25.6
GTEX-Z93S-2926-SM-57WB9 25.6
GTEX-12126-1026-SM-5P9JJ 25.3
GTEX-ZZPT-3026-SM-5GZXH 25.2
GTEX-WL46-2926-SM-3LK82 25.1
GTEX-ZAK1-3026-SM-5S2MJ 25.1
GTEX-13OVH-3026-SM-5MR4N 25.0
GTEX-12WSC-3026-SM-5GCNF 24.7
GTEX-XLM4-3026-SM-4AT6L 24.7
GTEX-11DXW-1126-SM-5H12Q 24.5
GTEX-14ASI-3026-SM-5S2PN 24.4
GTEX-QDT8-2926-SM-32PKC 24.4
GTEX-13PL6-3126-SM-5LUAR 24.3
GTEX-144GL-3026-SM-5Q5CW 24.3
GTEX-145MH-3026-SM-5Q5DZ 24.3
GTEX-13FLW-1426-SM-5K7YE 24.2
GTEX-13FXS-3126-SM-5J2NN 24.2
GTEX-YFC4-3126-SM-5PNV6 24.2
GTEX-13O3O-3126-SM-5KM3H 24.1
GTEX-11OC5-0726-SM-5P9JK 23.9
GTEX-13X6K-2926-SM-5Q5D5 23.9
GTEX-12ZZY-3026-SM-5GCOU 23.8
GTEX-QVJO-1426-SM-2S1QY 23.7
GTEX-145MF-2726-SM-5O995 23.6
GTEX-T2IS-3026-SM-32QPM 23.6
GTEX-1313W-3126-SM-5LZUI 23.4
GTEX-1192X-3126-SM-5N9BY 23.3
GTEX-12ZZZ-3026-SM-5BC67 23.2
GTEX-139T8-1026-SM-5J2MC 23.2
GTEX-Q2AG-2926-SM-2HMJ3 23.2
GTEX-13O3Q-2926-SM-5KM45 23.1
GTEX-R55F-1326-SM-5S2V4 23.0
GTEX-1117F-3226-SM-5N9CT 22.9
GTEX-13QIC-2926-SM-5J2NF 22.9
GTEX-1399T-3026-SM-5KLZC 22.8
GTEX-ZVT3-3026-SM-5E43N 22.6
GTEX-1128S-2726-SM-5H12C 22.3
GTEX-11EMC-3226-SM-5EGKW 22.2
GTEX-12WSD-3126-SM-5HL7P 22.1
GTEX-13S7M-3126-SM-5RQJQ 22.0
GTEX-QVUS-2826-SM-3GADB 22.0
GTEX-111FC-3126-SM-5GZZ2 21.9
GTEX-11ZUS-2926-SM-5FQSL 21.6
GTEX-RU72-3026-SM-5SI7Y 21.6
GTEX-11PRG-2926-SM-5987A 21.4
GTEX-11GSP-3226-SM-5986O 21.3
GTEX-12ZZW-2926-SM-5LZUP 21.2
GTEX-145MG-3026-SM-5RQJA 21.1
GTEX-PVOW-2526-SM-2XCF7 21.1
GTEX-X4XX-3026-SM-3NMB2 21.1
GTEX-13NYB-3026-SM-5IJD7 21.0
GTEX-UTHO-3026-SM-3GAFB 20.9
GTEX-NPJ7-2726-SM-2I3FT 20.8
GTEX-11EI6-3026-SM-5GZZO 20.6
GTEX-131XW-3126-SM-5LZUC 20.6
GTEX-Y111-2726-SM-4TT3N 20.6
GTEX-Y8DK-0826-SM-4TT3T 20.4
GTEX-11GS4-3126-SM-5A5LH 20.0
GTEX-13PVQ-3026-SM-5SI93 19.9
GTEX-11OF3-2926-SM-5HL78 19.7
GTEX-1445S-3026-SM-5O9BR 19.7
GTEX-ZE7O-3126-SM-5HL5X 19.7
GTEX-13FHP-3026-SM-5IJBS 19.6
GTEX-13OW7-3026-SM-5L3GY 19.6
GTEX-OXRN-2426-SM-2I5EQ 18.7
GTEX-N7MT-1126-SM-5SI7V 18.3
GTEX-12WSH-3026-SM-5CVNI 18.2
GTEX-13JUV-2926-SM-5LZX7 17.8
GTEX-13IVO-2926-SM-5L3CZ 17.6
GTEX-11O72-2926-SM-5BC4V 17.4
GTEX-ZAJG-3126-SM-5HL9J 17.4
GTEX-13X6J-3026-SM-5Q5CU 17.2
GTEX-11TTK-2926-SM-5PNYP 15.9
GTEX-13G51-3026-SM-5IJB8 15.6
GTEX-PWO3-0926-SM-2I5EY 14.5
GTEX-12WSA-2926-SM-5EQ4D 14.3
GTEX-147GR-3026-SM-5S2ML 13.8
GTEX-11NV4-2126-SM-5N9DS 13.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 24.1
Samples: 108

Max RPKM: 54.6
Min RPKM: 12.3
Std RPKM: 5.6
Median RPKM: 23.9
GTEX-13N2G-0011-R10a-SM-5MR34 54.6
GTEX-13X6K-0011-R10a-SM-5P9JR 37.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 34.1
GTEX-11H98-0011-R10b-SM-5NQ98 32.3
GTEX-13FHO-0011-R10b-SM-5J2MM 31.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 31.4
GTEX-14BIL-0011-R10a-SM-5SI75 31.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 30.4
GTEX-13O3Q-0011-R10b-SM-5KM39 30.2
GTEX-13QJC-0011-R10a-SM-5SI63 30.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 29.8
GTEX-T5JC-0011-R10A-SM-32PM2 29.8
GTEX-13NYS-0011-R10a-SM-5MR4S 29.4
GTEX-T6MN-0011-R10A-SM-32QP7 29.3
GTEX-1313W-0011-R10b-SM-5DUXA 29.0
GTEX-12WSE-0011-R10b-SM-5P9JV 28.9
GTEX-S7SE-0011-R10A-SM-2XCDF 28.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 28.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 28.6
GTEX-XLM4-0011-R10A-SM-4AT5P 28.6
GTEX-YFC4-0011-R10a-SM-4SOK5 28.5
GTEX-131XH-0011-R10a-SM-5EGLJ 28.3
GTEX-WVLH-0011-R10A-SM-3MJFM 28.3
GTEX-WZTO-0011-R10B-SM-4E3KB 28.1
GTEX-QDT8-0011-R10A-SM-32PKG 27.8
GTEX-131YS-0011-R10b-SM-5EQ5N 27.6
GTEX-145MG-0011-R10a-SM-5PNWG 27.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 27.4
GTEX-X4EP-0011-R10B-SM-4QASJ 27.1
GTEX-13S7M-0011-R10b-SM-5PNZB 26.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 26.7
GTEX-12WSF-0011-R10a-SM-5LZVH 26.4
GTEX-12WSM-0011-R10a-SM-5DUWV 26.4
GTEX-13QIC-0011-R10a-SM-5O9C7 26.4
GTEX-13SLX-0011-R10a-SM-5P9HV 26.3
GTEX-X585-0011-R10A-SM-46MUY 26.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 26.0
GTEX-13OW7-0011-R10a-SM-5L3H3 25.9
GTEX-13CZV-0011-R10b-SM-5LZYD 25.7
GTEX-12WSC-0011-R10a-SM-5GU57 25.5
GTEX-147GR-0011-R10b-SM-5S2UM 25.5
GTEX-WL46-0011-R10A-SM-3MJFQ 25.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 25.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 25.2
GTEX-13N1W-0011-R10b-SM-5MR4H 25.0
GTEX-14BIN-0011-R10a-SM-5S2UA 24.8
GTEX-145MH-0011-R10b-SM-5PNUK 24.7
GTEX-ZF28-0011-R10a-SM-4WWEH 24.6
GTEX-Z93S-0011-R10a-SM-4RGNM 24.3
GTEX-13X6J-0011-R10b-SM-5PNWA 24.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 24.1
GTEX-QMR6-0011-R10A-SM-32PKO 24.1
GTEX-QVUS-0011-R10A-SM-3GIK3 24.1
GTEX-13O3O-0011-R10a-SM-5LUA9 23.9
GTEX-13OVL-0011-R10a-SM-5L3GS 23.9
GTEX-145LS-0011-R10a-SM-5PNUQ 23.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 23.9
GTEX-X4XX-0011-R10B-SM-46MWO 23.9
GTEX-ZUA1-0011-R10a-SM-51MT6 23.9
GTEX-WWYW-0011-R10A-SM-3NB35 23.7
GTEX-NL3H-0011-R10A-SM-2I3E9 23.6
GTEX-X261-0011-R10B-SM-4E3JT 23.6
GTEX-11ZUS-0011-R10b-SM-5BC79 23.5
GTEX-11WQK-0011-R10a-SM-5BC6R 23.4
GTEX-13OW6-0011-R10a-SM-5L3HE 23.3
GTEX-N7MT-0011-R10A-SM-2I3E1 23.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 23.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 23.1
GTEX-13OW8-0011-R10a-SM-5L3H6 23.0
GTEX-13X6I-0011-R10a-SM-5PNWI 23.0
GTEX-1445S-0011-R10a-SM-5PNWB 23.0
GTEX-YJ89-0011-R10a-SM-4SOK9 22.8
GTEX-13FLW-0011-R10b-SM-5LZZF 22.7
GTEX-N7MS-0011-R10A-SM-2HMJK 22.7
GTEX-13FXS-0011-R10a-SM-5J2MA 22.6
GTEX-147F4-0011-R10b-SM-5S2WC 22.6
GTEX-13SLW-0011-R10a-SM-5S2UI 22.5
GTEX-145LU-0011-R10a-SM-5PNWJ 22.4
GTEX-13NYB-0011-R10a-SM-5KM43 21.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 21.3
GTEX-RVPU-0011-R10A-SM-2XCAH 21.0
GTEX-12WSD-0011-R10b-SM-5GU79 20.8
GTEX-12WSH-0011-R10a-SM-5LZUS 20.8
GTEX-P44H-0011-R10A-SM-2XCEK 20.8
GTEX-XMD1-0011-R10A-SM-4AT4A 20.7
GTEX-12126-0011-R10b-SM-5BC6T 20.5
GTEX-13JUV-0011-R10b-SM-5LZXR 20.2
GTEX-NL4W-0011-R10A-SM-2I3DY 19.7
GTEX-11WQC-0011-R10a-SM-57WCT 19.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 19.0
GTEX-12WSA-0011-R10b-SM-5P9ET 18.9
GTEX-13G51-0011-R10b-SM-5LZYF 18.6
GTEX-TSE9-0011-R10A-SM-3DB7O 18.5
GTEX-ZVT3-0011-R10b-SM-57WB6 18.0
GTEX-139TS-0011-R10a-SM-5K7TU 17.8
GTEX-OXRN-0011-R10A-SM-2I5GC 17.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 17.0
GTEX-13JVG-0011-R10b-SM-5KM2P 16.8
GTEX-ZV68-0011-R10a-SM-51MT7 16.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 15.5
GTEX-1477Z-0011-R10b-SM-5S2RF 15.5
GTEX-14753-0011-R10b-SM-5S2WE 15.1
GTEX-131XW-0011-R10a-SM-5DUVA 14.5
GTEX-13NZA-0011-R10b-SM-5KM54 14.2
GTEX-ZXG5-0011-R10a-SM-57WDD 13.9
GTEX-OXRO-0011-R10A-SM-2I5EH 13.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 12.8
GTEX-13IVO-0011-R10a-SM-5LZY3 12.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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