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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:93.0TPM
GTEx:56.7RPKM
FANTOM5:92.3Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:Medium
 

Antibody staining

Antibody HPA046841

 

Antibody HPA052867

 

Antibody CAB009746

 

Cells in glomeruli

Not detected   Low   Low  

Cells in tubules

Medium   Medium   Medium  
     
     
     

KIDNEY - HPA RNA-seq

Average TPM

93.0

overview Female, age 58
Sample 1
TPM: 125.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 96.7
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 94.3
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 87.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 40.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 100.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 106.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 117.8
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 67.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

56.7

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 56.7
Samples: 32

Max RPKM: 105.1
Min RPKM: 22.4
Std RPKM: 19.2
Median RPKM: 58.6
GTEX-QLQW-1626-SM-4R1K1 105.1
GTEX-145MN-0326-SM-5QGQI 86.9
GTEX-ZYFG-1626-SM-5GZYY 84.0
GTEX-ZLFU-0926-SM-5P9F8 78.6
GTEX-1399S-0526-SM-5IJG8 76.6
GTEX-ZVZP-0926-SM-5GIDB 74.4
GTEX-13OVI-1126-SM-5KLZF 73.4
GTEX-XPVG-0526-SM-4B65N 71.3
GTEX-147F4-2626-SM-5Q5CS 67.4
GTEX-QDVN-1626-SM-48TZC 66.8
GTEX-11TTK-1926-SM-5PNW8 63.4
GTEX-12696-0926-SM-5FQTV 62.8
GTEX-Y5V6-2026-SM-5IFHO 61.9
GTEX-RN64-1626-SM-48FD7 61.3
GTEX-13O1R-2526-SM-5N9FW 60.6
GTEX-1497J-0826-SM-5NQAJ 60.6
GTEX-UPIC-1126-SM-4IHLO 56.7
GTEX-13RTJ-2226-SM-5S2Q1 56.2
GTEX-P4QS-1126-SM-3NMD5 52.3
GTEX-11GS4-2326-SM-5A5KS 51.8
GTEX-12WSG-0826-SM-5EQ5A 51.5
GTEX-ZYT6-2226-SM-5GIC9 51.5
GTEX-13112-2126-SM-5GCO4 45.2
GTEX-ZC5H-1726-SM-5HL7X 42.3
GTEX-13NYB-1726-SM-5N9G2 39.6
GTEX-13OVL-1826-SM-5KLZR 37.3
GTEX-T5JC-1526-SM-4DM68 36.2
GTEX-11OF3-1326-SM-5N9FJ 36.0
GTEX-13OW6-1826-SM-5N9F9 29.1
GTEX-N7MS-1626-SM-3LK5F 27.6
GTEX-NPJ8-2226-SM-3TW8D 24.0
GTEX-ZYFD-1526-SM-5NQ7T 22.4
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

92.3

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 92.3
FF:10017-101C8 60,62,63 years, female 92.3

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