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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:52.0TPM
GTEx:42.4RPKM
FANTOM5:117.1Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Medium
 

Antibody staining

Antibody HPA046841

 

Antibody HPA052867

 

Antibody CAB009746

 

Bile duct cells

Not detected   Not detected   Medium  

Hepatocytes

Medium   Medium   High  
     
     
     

LIVER - HPA RNA-seq

Average TPM

52.0

N/A Female, age 60
Sample 1
TPM: 51.4
overview Male, age 54
Sample 2
TPM: 38.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 54.5
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 38.1
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 33.3
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 63.1
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 56.1
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 48.8
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 47.4
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 89.1
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

42.4

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 42.4
Samples: 119

Max RPKM: 88.5
Min RPKM: 8.7
Std RPKM: 18
Median RPKM: 36.4
GTEX-S32W-1926-SM-4AD63 88.5
GTEX-QDVN-0826-SM-48TZ2 88.4
GTEX-Y5LM-0426-SM-4VBRO 85.3
GTEX-144GM-1326-SM-5LU5E 83.9
GTEX-YB5E-0326-SM-5IFHU 83.0
GTEX-13PVR-0126-SM-5S2PY 82.6
GTEX-131XE-0326-SM-5LZVO 80.1
GTEX-13N11-0926-SM-5IJG2 79.6
GTEX-REY6-1226-SM-48FDR 75.5
GTEX-TKQ2-1726-SM-4DXUP 70.6
GTEX-RM2N-1926-SM-48FCU 69.7
GTEX-146FH-1526-SM-5NQBU 68.0
GTEX-QEL4-1226-SM-447A4 67.9
GTEX-ZTPG-1426-SM-51MT3 66.7
GTEX-12696-0826-SM-5EGGE 66.1
GTEX-132NY-0926-SM-5P9G3 65.3
GTEX-YEC4-0826-SM-5P9FV 63.9
GTEX-13NZ9-1326-SM-5MR3V 63.1
GTEX-14C38-1526-SM-5RQJ7 62.3
GTEX-13FTW-1126-SM-5J2NV 61.7
GTEX-ZF29-2026-SM-4WWB7 61.0
GTEX-Q734-0326-SM-48U15 60.7
GTEX-WFON-1726-SM-4LVMQ 59.9
GTEX-X3Y1-2726-SM-4PQZH 59.4
GTEX-S33H-1626-SM-4AD68 58.7
GTEX-ZPU1-0826-SM-57WG2 58.3
GTEX-S4Z8-0526-SM-4AD4T 58.2
GTEX-139YR-0226-SM-5IFEM 54.8
GTEX-Z9EW-0426-SM-5CVM9 54.4
GTEX-13N2G-0926-SM-5IFGJ 54.0
GTEX-YFC4-1526-SM-5IFJS 53.9
GTEX-11EQ9-0526-SM-5A5JZ 53.8
GTEX-1497J-0726-SM-5Q5D1 53.2
GTEX-P78B-1326-SM-3P611 52.3
GTEX-13SLX-1226-SM-5S2Q6 50.6
GTEX-ZVP2-0626-SM-51MSO 50.0
GTEX-X4XY-1626-SM-46MVN 49.7
GTEX-VUSG-0126-SM-4KL1X 49.1
GTEX-U3ZN-0226-SM-3DB8D 49.0
GTEX-UPIC-0926-SM-4IHLV 48.9
GTEX-12WSL-0226-SM-5CVMJ 48.7
GTEX-X261-1726-SM-4PQYT 46.5
GTEX-13113-1326-SM-5GCOI 46.4
GTEX-ZZPU-0426-SM-5GZYH 45.5
GTEX-12WSG-0626-SM-5FQTQ 43.6
GTEX-PX3G-0826-SM-48TZS 43.5
GTEX-145MF-0826-SM-5QGQA 43.3
GTEX-WYVS-1926-SM-4PQZ2 43.3
GTEX-Y5V5-0926-SM-4VBPZ 43.3
GTEX-R53T-0326-SM-48FEC 41.3
GTEX-1212Z-0226-SM-59HLF 41.1
GTEX-147F4-1426-SM-5LUA8 40.8
GTEX-139TU-0826-SM-5IJFG 40.5
GTEX-147JS-1126-SM-5RQIW 39.8
GTEX-139TS-1426-SM-5IFJD 39.1
GTEX-1399R-1226-SM-5P9GF 38.9
GTEX-14A5I-1726-SM-5QGQ5 38.3
GTEX-14E1K-0326-SM-5S2PE 37.4
GTEX-12KS4-1326-SM-5LUB3 37.2
GTEX-11WQC-0726-SM-5EQMR 36.4
GTEX-13QJC-0726-SM-5RQJK 36.4
GTEX-WQUQ-1926-SM-4OOSA 36.4
GTEX-RU72-1426-SM-46MUF 36.3
GTEX-ZYY3-0626-SM-5NQ6W 36.0
GTEX-12WSI-0226-SM-5GCNA 35.5
GTEX-ZF2S-3026-SM-4WWCH 35.5
GTEX-UTHO-2426-SM-4JBHD 35.4
GTEX-12WSM-0726-SM-5GCOW 34.9
GTEX-14DAQ-1726-SM-5S2R2 34.5
GTEX-14AS3-0126-SM-5Q5F4 33.1
GTEX-UPK5-1426-SM-4JBHH 33.1
GTEX-OOBJ-0826-SM-3NB2K 32.9
GTEX-ZAB5-0426-SM-5CVMI 32.7
GTEX-QEG4-1826-SM-4R1JN 32.6
GTEX-QESD-2026-SM-447BI 32.4
GTEX-XOTO-0826-SM-4B65O 32.1
GTEX-ZVT3-1626-SM-5GU66 31.1
GTEX-11DXZ-0126-SM-5EGGY 30.9
GTEX-1399T-0826-SM-5IFES 30.4
GTEX-1269C-0626-SM-5FQSS 30.3
GTEX-ZAB4-0826-SM-5LU9D 30.2
GTEX-Q2AG-1126-SM-48U1P 29.7
GTEX-13NYB-1026-SM-5IFH3 29.5
GTEX-145MO-2326-SM-5NQ9K 29.5
GTEX-11OF3-0726-SM-5BC4Z 29.0
GTEX-13FTZ-0726-SM-5IFFY 28.9
GTEX-13FLV-0326-SM-5N9DJ 28.7
GTEX-QV44-0326-SM-4R1KD 28.3
GTEX-WZTO-0626-SM-4PQYY 28.2
GTEX-13NZB-0626-SM-5IFH6 28.1
GTEX-RTLS-1326-SM-46MUN 28.1
GTEX-11ZVC-0726-SM-5FQT9 27.7
GTEX-ZYT6-0626-SM-5E45V 27.5
GTEX-X4EP-1026-SM-4QAS5 26.9
GTEX-RWSA-1426-SM-47JXA 26.7
GTEX-SJXC-1226-SM-4DM78 26.7
GTEX-12WSD-1426-SM-5GCN9 26.6
GTEX-T6MN-1226-SM-3NMA5 26.6
GTEX-14753-1626-SM-5NQ9L 26.0
GTEX-11NUK-1226-SM-5P9GM 25.5
GTEX-131XH-0626-SM-5LZWH 25.5
GTEX-131YS-1626-SM-5HL6C 25.4
GTEX-XBEC-1526-SM-4AT68 25.0
GTEX-13O3O-1826-SM-5IFGW 24.6
GTEX-11ZTS-1426-SM-5EQMM 24.4
GTEX-11ZUS-2526-SM-59872 24.4
GTEX-X4EO-1126-SM-4QARQ 24.3
GTEX-13112-1426-SM-5EGH8 23.9
GTEX-YECK-1926-SM-4W21H 22.5
GTEX-11NV4-1326-SM-5HL6V 22.2
GTEX-13VXU-0926-SM-5IFFH 22.1
GTEX-ZVT4-0626-SM-5E45T 22.1
GTEX-13OW6-2626-SM-5IFF2 21.3
GTEX-11DXY-0526-SM-5EGGQ 20.8
GTEX-11GSP-0626-SM-5986T 20.5
GTEX-RN64-1826-SM-48FDV 19.6
GTEX-145LU-1326-SM-5LU9N 19.3
GTEX-RNOR-1426-SM-48FDJ 18.9
GTEX-12ZZZ-1326-SM-59HKW 8.7
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

117.1

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 117.1
FF:10018-101C9 64,69,70 years, mixed 117.1

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