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Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:5.4RPKM

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA047750

 

Glial cells

Not detected  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

5.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 5.4
Samples: 117

Max RPKM: 19
Min RPKM: 0.7
Std RPKM: 3.9
Median RPKM: 4
GTEX-12WSA-0011-R5b-SM-5GU5I 19.0
GTEX-X585-0011-R5A-SM-46MVI 18.0
GTEX-12WSB-0011-R5b-SM-5GU67 16.4
GTEX-144GO-0011-R5a-SM-5PNUR 14.7
GTEX-145MG-0011-R5b-SM-5S2VU 14.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 14.3
GTEX-S7PM-0011-R5A-SM-3NM8G 14.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 12.7
GTEX-13S7M-0011-R5b-SM-5P9HS 12.4
GTEX-14BIM-0011-R5b-SM-5S2RM 12.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 11.6
GTEX-12ZZX-0011-R5a-SM-5HL89 11.5
GTEX-X261-0011-R5A-SM-3NMB4 11.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 11.1
GTEX-ZVT3-0011-R5a-SM-51MSI 11.1
GTEX-RU72-0011-R5A-SM-2TF6U 10.9
GTEX-XMD1-0011-R5A-SM-4AT47 10.6
GTEX-13VXU-0011-R5a-SM-5O9D7 10.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 9.7
GTEX-RVPV-0011-R5A-SM-2TF69 9.5
GTEX-139TT-0011-R5b-SM-5K7W8 8.2
GTEX-13FLV-0011-R5a-SM-5LZWT 7.9
GTEX-1445S-0011-R5a-SM-5PNUS 7.6
GTEX-139TS-0011-R5b-SM-5J2MZ 7.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 7.3
GTEX-YJ89-0011-R5a-SM-4V6GM 7.1
GTEX-14BIN-0011-R5b-SM-5SI78 7.0
GTEX-1399T-0011-R5b-SM-5IJDK 6.9
GTEX-N7MT-0011-R5a-SM-2I3G6 6.8
GTEX-S7SE-0011-R5A-SM-2XCDA 6.8
GTEX-T6MN-0011-R5A-SM-32QPD 6.6
GTEX-13OW5-0011-R5b-SM-5L3FR 6.5
GTEX-11OF3-0011-R5a-SM-57WB4 6.3
GTEX-13NZA-0011-R5b-SM-5KM4K 6.2
GTEX-ZV68-0011-R5a-SM-4YCDW 6.2
GTEX-WVLH-0011-R5A-SM-3MJFW 6.1
GTEX-13X6K-0011-R5b-SM-5PNUE 6.0
GTEX-WZTO-0011-R5B-SM-3NMC5 6.0
GTEX-144GL-0011-R5b-SM-5PNUJ 5.6
GTEX-13G51-0011-R5a-SM-5L3EB 5.2
GTEX-13OVH-0011-R5b-SM-5KM4L 5.2
GTEX-TSE9-0011-R5A-SM-3DB7J 5.2
GTEX-13CZV-0011-R5a-SM-5K7XA 5.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 5.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 5.0
GTEX-13OW6-0011-R5a-SM-5O9BK 4.9
GTEX-N7MS-0011-R5a-SM-2HMK8 4.9
GTEX-13112-0011-R5b-SM-5DUV8 4.8
GTEX-131YS-0011-R5b-SM-5K7YB 4.8
GTEX-RVPU-0011-R5A-SM-2XCAD 4.7
GTEX-13X6I-0011-R5a-SM-5PNWW 4.5
GTEX-XOTO-0011-R5A-SM-4B657 4.5
GTEX-ZXG5-0011-R5b-SM-57WBN 4.5
GTEX-R55E-0011-R5A-SM-2TC5N 4.4
GTEX-ZUA1-0011-R5b-SM-51MTG 4.4
GTEX-13NYB-0011-R5a-SM-5MR45 4.3
GTEX-13OW7-0011-R5b-SM-5O9DM 4.3
GTEX-11GSP-0011-R5a-SM-57WBE 4.1
GTEX-13CIG-0011-R5b-SM-5L3F2 4.0
GTEX-13JUV-0011-R5a-SM-5LZY5 4.0
GTEX-145LS-0011-R5a-SM-5SI65 3.9
GTEX-11UD1-0011-R5b-SM-5P9FP 3.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 3.7
GTEX-13OVL-0011-R5b-SM-5L3FU 3.7
GTEX-12WSC-0011-R5b-SM-5CVNS 3.6
GTEX-QMR6-0011-R5A-SM-32PKT 3.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 3.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 3.5
GTEX-NL3H-0011-R5a-SM-2I3GB 3.5
GTEX-13FLW-0011-R5a-SM-5LZX6 3.4
GTEX-13JVG-0011-R5a-SM-5MR4O 3.4
GTEX-13X6J-0011-R5b-SM-5PNWT 3.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 3.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 3.2
GTEX-X4XX-0011-R5A-SM-46MWN 3.2
GTEX-11WQC-0011-R5a-SM-5BC74 3.1
GTEX-13O3O-0011-R5b-SM-5KM44 3.1
GTEX-12WSH-0011-R5b-SM-5P9F3 3.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 3.0
GTEX-WL46-0011-R5A-SM-3LK6V 3.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 2.9
GTEX-145MH-0011-R5a-SM-5P9JT 2.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 2.8
GTEX-1477Z-0011-R5b-SM-5PNUO 2.8
GTEX-NL4W-0011-R5a-SM-2I3GD 2.8
GTEX-11H98-0011-R5b-SM-57WCF 2.7
GTEX-13CF2-0011-R5a-SM-5LZWS 2.7
GTEX-13SLX-0011-R5a-SM-5O9BV 2.7
GTEX-11NV4-0011-R5a-SM-5NQ88 2.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 2.6
GTEX-P44H-0011-R5A-SM-2XCEX 2.6
GTEX-12WSD-0011-R5b-SM-5CVNG 2.5
GTEX-T5JC-0011-R5A-SM-32PLK 2.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 2.4
GTEX-QVJO-0011-R5A-SM-2S1QM 2.3
GTEX-13FHP-0011-R5b-SM-5LZY2 2.2
GTEX-PVOW-0011-R5A-SM-32PL7 2.2
GTEX-T2IS-0011-R5A-SM-32QP4 2.2
GTEX-13FXS-0011-R5b-SM-5LZYE 2.1
GTEX-NPJ7-0011-R5a-SM-33HBK 2.1
GTEX-OXRN-0011-R5A-SM-2I5EF 2.1
GTEX-YFC4-0011-R5a-SM-4RGLR 2.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 2.1
GTEX-14ABY-0011-R5b-SM-5SI7B 2.0
GTEX-13NYS-0011-R5a-SM-5MR4D 1.9
GTEX-UTHO-0011-R5A-SM-3GIJD 1.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 1.9
GTEX-1313W-0011-R5b-SM-5L3EP 1.8
GTEX-12WSF-0011-R5a-SM-5HL8K 1.7
GTEX-139T8-0011-R5b-SM-5J1MO 1.7
GTEX-132Q8-0011-R5a-SM-5IJDM 1.6
GTEX-Z93S-0011-R5b-SM-4RGNI 1.6
GTEX-ZE7O-0011-R5a-SM-57WBO 1.6
GTEX-OHPN-0011-R5A-SM-2I5FF 1.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 0.9
GTEX-WWYW-0011-R5A-SM-3NB3E 0.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 0.7
Show all

CAUDATE - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.