Fields »
ABOUT
HELP
BLOG
GRN

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:139.1TPM
GTEx:87.0RPKM
FANTOM5:270.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Not available
Chondrocytes:Low
 

Antibody staining

Antibody HPA008763

  

Antibody HPA028747

  

Antibody CAB019394

  

Adipocytes

 Low   Not detected   Not detected  

Fibroblasts

 Low   Medium   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Low  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA008763

  

Antibody HPA028747

  

Antibody CAB019394

  

Adipocytes

 Low   Not detected   Not detected  

Fibroblasts

 Low   Medium   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

139.1
N/A Female, age 80
Sample 1
TPM: 129.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 85.3
N/A Female, age 57
Sample 3
TPM: 84.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 140.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 256.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

87.0

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 90.9
Samples: 350

Max RPKM: 341.9
Min RPKM: 43.7
Std RPKM: 35
Median RPKM: 83.1
GTEX-13NYS-0226-SM-5MR49 341.9
GTEX-111VG-2326-SM-5N9BK 276.0
GTEX-11GSO-2326-SM-5A5LX 259.9
GTEX-XMD2-0226-SM-4WWEE 223.2
GTEX-13NZA-0126-SM-5K7UH 206.0
GTEX-QDT8-0226-SM-32PL4 199.9
GTEX-146FQ-0226-SM-5NQAL 198.7
GTEX-13VXT-0226-SM-5LU9Q 187.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 81.1
Samples: 227

Max RPKM: 170.5
Min RPKM: 29.6
Std RPKM: 24.7
Median RPKM: 77.3
GTEX-13X6H-1726-SM-5Q5EH 170.5
GTEX-13FHO-2026-SM-5J1OA 151.8
GTEX-132AR-0526-SM-5J2MJ 150.0
GTEX-ZT9X-0926-SM-5O9C4 148.6
GTEX-13N11-1826-SM-5IJDS 145.5
GTEX-117YX-0726-SM-5GIET 143.1
GTEX-Y3I4-0726-SM-4TT7M 142.5
GTEX-ZZPU-0326-SM-5N9BJ 140.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

270.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 270.0
FF:10010-101C1 65,65,76 years, mixed 270.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.