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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:134.3TPM
GTEx:104.1RPKM
FANTOM5:236.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA008763

 

Antibody HPA028747

 

Antibody CAB019394

 

Glandular cells

High   High   Medium  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

134.3

overview Male, age 65
Sample 1
TPM: 107.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 136.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 168.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 125.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

104.1

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 104.1
Samples: 88

Max RPKM: 167.6
Min RPKM: 50.7
Std RPKM: 25.2
Median RPKM: 105.2
GTEX-VUSG-1726-SM-4KKZL 167.6
GTEX-111YS-1426-SM-5GID8 157.8
GTEX-ZQG8-2526-SM-57WEQ 152.0
GTEX-WFJO-0926-SM-4LVM2 151.8
GTEX-11NSD-1726-SM-5N9C3 143.8
GTEX-WFG8-1626-SM-4LVMB 141.5
GTEX-WRHK-1026-SM-4MVOD 140.7
GTEX-Z9EW-0926-SM-5CVMM 139.8
GTEX-11XUK-1426-SM-5EQMG 136.9
GTEX-11VI4-1626-SM-5EQKO 136.3
GTEX-WH7G-1626-SM-4LVMY 134.8
GTEX-ZTX8-0526-SM-59HLD 129.7
GTEX-ZVP2-1726-SM-5GU5P 128.5
GTEX-14E6E-1626-SM-5RQI7 127.8
GTEX-Y5LM-1626-SM-4VDTB 127.8
GTEX-11P7K-1626-SM-5GU63 126.4
GTEX-X15G-1426-SM-4PQZK 124.9
GTEX-YB5E-1526-SM-5IFIE 123.8
GTEX-13FTW-2026-SM-5IJE2 122.4
GTEX-ZLV1-1126-SM-4WWBW 122.1
GTEX-11P82-0826-SM-5P9GU 122.0
GTEX-13D11-0726-SM-5LZZB 121.4
GTEX-ZVT2-2126-SM-5NQ93 121.2
GTEX-ZYFG-2026-SM-5E43Y 120.7
GTEX-13FH7-1226-SM-5IJFK 119.5
GTEX-ZZ64-0526-SM-5GZXM 119.2
GTEX-YEC4-1726-SM-4W21E 119.0
GTEX-1399S-2026-SM-5KM4B 117.9
GTEX-ZTPG-2626-SM-57WFX 117.8
GTEX-ZLFU-1526-SM-4WWBT 116.3
GTEX-13113-1226-SM-5EGHT 116.1
GTEX-131XG-1726-SM-5LZUR 114.0
GTEX-14DAR-1426-SM-5RQIR 111.7
GTEX-139T6-1026-SM-5IJGC 110.2
GTEX-ZA64-1226-SM-5HL7B 109.8
GTEX-WFG7-1726-SM-4LVME 109.0
GTEX-11EQ9-1326-SM-5985X 107.9
GTEX-XBED-1426-SM-4AT4G 107.6
GTEX-XAJ8-0526-SM-47JYK 107.2
GTEX-ZVZP-1826-SM-5GZXB 107.1
GTEX-13O61-1326-SM-5KM31 106.5
GTEX-ZC5H-2326-SM-4WAYT 106.4
GTEX-145LT-1026-SM-5LU9O 105.8
GTEX-Y9LG-1626-SM-5IFHM 105.2
GTEX-11DXX-1626-SM-5H11H 105.2
GTEX-ZXES-1526-SM-5NQ95 103.7
GTEX-13RTK-0826-SM-5Q5C6 103.2
GTEX-13PL7-2626-SM-5IFH4 102.0
GTEX-1399U-2126-SM-5IFEZ 101.9
GTEX-ZEX8-1826-SM-57WBH 100.7
GTEX-VJYA-0926-SM-4KL1N 100.5
GTEX-145ME-0926-SM-5O9AR 100.5
GTEX-XUZC-1426-SM-4BRV3 99.8
GTEX-ZP4G-1626-SM-57WGD 99.7
GTEX-ZTSS-0926-SM-59865 98.8
GTEX-XGQ4-1326-SM-4GIDU 98.3
GTEX-11I78-1126-SM-5A5K5 97.4
GTEX-1122O-1326-SM-5H11F 95.4
GTEX-ZPCL-1726-SM-57WEO 94.1
GTEX-13O21-1026-SM-5IJDU 93.5
GTEX-1192X-2526-SM-59868 92.0
GTEX-139YR-2226-SM-5IFFW 91.8
GTEX-13QBU-1926-SM-5IJEW 91.3
GTEX-X5EB-1626-SM-4E3IV 89.8
GTEX-Y114-1426-SM-4TT6W 88.1
GTEX-ZPIC-2326-SM-57WDW 87.8
GTEX-XMK1-1826-SM-4B66F 86.8
GTEX-131XF-1326-SM-5GCMQ 85.8
GTEX-12BJ1-1926-SM-5HL9Z 84.6
GTEX-ZYWO-1526-SM-5SIAL 83.2
GTEX-11DXZ-1326-SM-5H11X 83.0
GTEX-13CF3-1226-SM-5LZXN 81.6
GTEX-UPK5-2026-SM-4JBIM 80.6
GTEX-YF7O-1826-SM-5IFIU 80.5
GTEX-XXEK-1026-SM-4BRUW 80.0
GTEX-133LE-1426-SM-5IFH1 79.9
GTEX-117YX-0326-SM-5GICL 77.8
GTEX-WQUQ-2426-SM-4MVNW 71.3
GTEX-111CU-1326-SM-5NQ8L 68.1
GTEX-13111-1426-SM-5DUW3 67.0
GTEX-WEY5-1526-SM-4LMJF 63.2
GTEX-ZF2S-1726-SM-57WFT 63.2
GTEX-1399R-2026-SM-5K7WN 61.1
GTEX-13OVI-1926-SM-5IJCG 57.3
GTEX-Y3IK-1726-SM-4YCCR 56.8
GTEX-12WSK-1526-SM-5CVNO 52.8
GTEX-ZQUD-0926-SM-57WE3 51.0
GTEX-148VJ-2226-SM-5NQ9M 50.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

236.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 236.4
FF:10024-101D6 15,40,85 years, mixed 236.4

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The Human Protein Atlas project is funded
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