Fields »
ABOUT
HELP
BLOG
SDF4

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:96.5TPM
GTEx:60.0RPKM
FANTOM5:62.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Low
 
 

Antibody staining

Antibody HPA011249

  

Antibody CAB015227

  

Adipocytes

 Not detected  

Chondrocytes

 Low   Not detected  

Fibroblasts

 Low   Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA011249

  

Antibody CAB015227

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

96.5
N/A Female, age 80
Sample 1
TPM: 119.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 80.4
N/A Female, age 57
Sample 3
TPM: 83.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 107.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 91.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

60.0

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 59.6
Samples: 350

Max RPKM: 100.9
Min RPKM: 34.2
Std RPKM: 9.5
Median RPKM: 59.3
GTEX-XYKS-2726-SM-4E3IC 100.9
GTEX-11EMC-2826-SM-5PNY6 90.7
GTEX-XAJ8-0926-SM-47JXZ 87.6
GTEX-111CU-1826-SM-5GZYN 82.5
GTEX-X15G-2326-SM-4PQZS 82.4
GTEX-Y114-2326-SM-4TT7X 81.4
GTEX-X4XY-0326-SM-46MVZ 80.7
GTEX-WFON-2226-SM-3TW8W 80.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 60.6
Samples: 227

Max RPKM: 102.3
Min RPKM: 32.6
Std RPKM: 9.4
Median RPKM: 59.7
GTEX-13X6H-1726-SM-5Q5EH 102.3
GTEX-146FH-2026-SM-5SI9I 96.1
GTEX-1128S-0926-SM-5GZZU 93.0
GTEX-13IVO-2426-SM-5K7V9 89.6
GTEX-XUZC-1126-SM-4BOPZ 86.7
GTEX-132AR-0526-SM-5J2MJ 83.8
GTEX-ZAJG-1626-SM-5HL7I 82.1
GTEX-13NZ9-2026-SM-5KM1U 81.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

62.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 62.5
FF:10010-101C1 65,65,76 years, mixed 62.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.