Tissue expression of SDF4 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	58.3	TPM
GTEx:	40.2	RPKM
FANTOM5:	62.7	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Low

Antibody staining	Antibody HPA011249	Antibody CAB015227
Squamous epithelial cells	Low	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	58.3

Female, age 70

Sample 1
TPM: 58.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 57.0

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 59.1

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	40.2

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 40.2

Samples: 286

Max RPKM: 80.8
Min RPKM: 21.6
Std RPKM: 8.6
Median RPKM: 39.2

GTEX-R55D-1126-SM-48FEB

80.8

GTEX-144GO-2726-SM-5O9A2

72.9

GTEX-R45C-1226-SM-48FEE

70.2

GTEX-13CF3-1626-SM-5IFG9

62.9

GTEX-RUSQ-0826-SM-47JWW

60.1

GTEX-ZZPT-1426-SM-5N9C5

59.8

GTEX-13PVQ-1726-SM-5IFF3

59.6

GTEX-13X6I-1026-SM-5LU4C

59.3

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	62.7

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 62.7

FF:10015-101C6

68,74,75 years, mixed

62.7