We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SDF4
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:65.3TPM
GTEx:63.8RPKM
FANTOM5:97.5Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:High
Cells in tubules:High
 

Antibody staining

Antibody HPA011249

 

Antibody CAB015227

 

Cells in glomeruli

High   Medium  

Cells in tubules

High   Medium  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

65.3

overview Female, age 58
Sample 1
TPM: 121.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 102.2
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 100.2
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 95.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 13.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 36.1
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 50.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 48.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 20.0
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

63.8

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 63.8
Samples: 32

Max RPKM: 94.7
Min RPKM: 26.8
Std RPKM: 16.4
Median RPKM: 67.3
GTEX-145MN-0326-SM-5QGQI 94.7
GTEX-QLQW-1626-SM-4R1K1 86.4
GTEX-ZVZP-0926-SM-5GIDB 82.4
GTEX-1497J-0826-SM-5NQAJ 81.0
GTEX-QDVN-1626-SM-48TZC 78.2
GTEX-11TTK-1926-SM-5PNW8 77.6
GTEX-1399S-0526-SM-5IJG8 76.6
GTEX-ZLFU-0926-SM-5P9F8 75.6
GTEX-12WSG-0826-SM-5EQ5A 74.0
GTEX-XPVG-0526-SM-4B65N 72.6
GTEX-12696-0926-SM-5FQTV 72.1
GTEX-RN64-1626-SM-48FD7 72.0
GTEX-ZYFG-1626-SM-5GZYY 71.1
GTEX-147F4-2626-SM-5Q5CS 68.9
GTEX-13112-2126-SM-5GCO4 68.8
GTEX-13OVI-1126-SM-5KLZF 67.4
GTEX-ZYT6-2226-SM-5GIC9 67.3
GTEX-13RTJ-2226-SM-5S2Q1 66.8
GTEX-UPIC-1126-SM-4IHLO 66.6
GTEX-P4QS-1126-SM-3NMD5 64.9
GTEX-13O1R-2526-SM-5N9FW 60.4
GTEX-11GS4-2326-SM-5A5KS 60.3
GTEX-ZC5H-1726-SM-5HL7X 57.6
GTEX-Y5V6-2026-SM-5IFHO 55.9
GTEX-13OVL-1826-SM-5KLZR 54.1
GTEX-T5JC-1526-SM-4DM68 53.9
GTEX-13OW6-1826-SM-5N9F9 41.9
GTEX-13NYB-1726-SM-5N9G2 40.1
GTEX-ZYFD-1526-SM-5NQ7T 39.6
GTEX-11OF3-1326-SM-5N9FJ 37.6
GTEX-NPJ8-2226-SM-3TW8D 26.9
GTEX-N7MS-1626-SM-3LK5F 26.8
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

97.5

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 97.5
FF:10017-101C8 60,62,63 years, female 97.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.