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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:131.3TPM
GTEx:75.5RPKM
FANTOM5:182.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA011249

 

Antibody CAB015227

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

131.3

overview Male, age 65
Sample 1
TPM: 120.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 146.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 126.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 131.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

75.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 75.5
Samples: 88

Max RPKM: 111
Min RPKM: 45.1
Std RPKM: 15.4
Median RPKM: 76.2
GTEX-14DAR-1426-SM-5RQIR 111.0
GTEX-ZTSS-0926-SM-59865 106.6
GTEX-YB5E-1526-SM-5IFIE 105.7
GTEX-111YS-1426-SM-5GID8 104.6
GTEX-ZYFG-2026-SM-5E43Y 103.7
GTEX-ZLV1-1126-SM-4WWBW 101.7
GTEX-YEC4-1726-SM-4W21E 101.4
GTEX-YF7O-1826-SM-5IFIU 101.2
GTEX-13D11-0726-SM-5LZZB 96.4
GTEX-XUZC-1426-SM-4BRV3 95.7
GTEX-11EQ9-1326-SM-5985X 95.0
GTEX-145LT-1026-SM-5LU9O 94.7
GTEX-1122O-1326-SM-5H11F 92.8
GTEX-11DXX-1626-SM-5H11H 91.4
GTEX-13113-1226-SM-5EGHT 91.0
GTEX-WQUQ-2426-SM-4MVNW 90.1
GTEX-ZXES-1526-SM-5NQ95 90.0
GTEX-XGQ4-1326-SM-4GIDU 89.9
GTEX-ZTX8-0526-SM-59HLD 89.4
GTEX-X5EB-1626-SM-4E3IV 89.3
GTEX-Y9LG-1626-SM-5IFHM 86.4
GTEX-131XG-1726-SM-5LZUR 85.4
GTEX-ZVZP-1826-SM-5GZXB 85.4
GTEX-ZYWO-1526-SM-5SIAL 85.2
GTEX-XBED-1426-SM-4AT4G 84.6
GTEX-UPK5-2026-SM-4JBIM 83.7
GTEX-11P7K-1626-SM-5GU63 83.5
GTEX-ZZ64-0526-SM-5GZXM 82.9
GTEX-13FTW-2026-SM-5IJE2 82.1
GTEX-131XF-1326-SM-5GCMQ 81.5
GTEX-ZA64-1226-SM-5HL7B 81.1
GTEX-VJYA-0926-SM-4KL1N 80.1
GTEX-ZPCL-1726-SM-57WEO 79.8
GTEX-11P82-0826-SM-5P9GU 79.7
GTEX-13PL7-2626-SM-5IFH4 79.5
GTEX-11DXZ-1326-SM-5H11X 78.9
GTEX-11I78-1126-SM-5A5K5 78.4
GTEX-WFG7-1726-SM-4LVME 78.4
GTEX-XXEK-1026-SM-4BRUW 78.2
GTEX-13RTK-0826-SM-5Q5C6 77.5
GTEX-WFJO-0926-SM-4LVM2 77.2
GTEX-WFG8-1626-SM-4LVMB 77.1
GTEX-14E6E-1626-SM-5RQI7 76.7
GTEX-1399S-2026-SM-5KM4B 76.2
GTEX-11NSD-1726-SM-5N9C3 76.1
GTEX-139YR-2226-SM-5IFFW 72.6
GTEX-133LE-1426-SM-5IFH1 72.5
GTEX-WRHK-1026-SM-4MVOD 72.4
GTEX-ZTPG-2626-SM-57WFX 72.0
GTEX-13FH7-1226-SM-5IJFK 72.0
GTEX-XAJ8-0526-SM-47JYK 71.6
GTEX-ZLFU-1526-SM-4WWBT 71.4
GTEX-Y5LM-1626-SM-4VDTB 69.7
GTEX-ZEX8-1826-SM-57WBH 69.5
GTEX-ZVT2-2126-SM-5NQ93 69.4
GTEX-13O61-1326-SM-5KM31 68.8
GTEX-X15G-1426-SM-4PQZK 68.3
GTEX-WH7G-1626-SM-4LVMY 67.4
GTEX-139T6-1026-SM-5IJGC 67.1
GTEX-1399R-2026-SM-5K7WN 66.8
GTEX-13111-1426-SM-5DUW3 66.3
GTEX-ZVP2-1726-SM-5GU5P 65.4
GTEX-13CF3-1226-SM-5LZXN 65.3
GTEX-11XUK-1426-SM-5EQMG 64.9
GTEX-1192X-2526-SM-59868 64.8
GTEX-Y114-1426-SM-4TT6W 64.4
GTEX-12BJ1-1926-SM-5HL9Z 64.0
GTEX-111CU-1326-SM-5NQ8L 63.4
GTEX-Z9EW-0926-SM-5CVMM 63.3
GTEX-117YX-0326-SM-5GICL 61.5
GTEX-ZQG8-2526-SM-57WEQ 61.5
GTEX-ZPIC-2326-SM-57WDW 61.2
GTEX-VUSG-1726-SM-4KKZL 60.8
GTEX-ZC5H-2326-SM-4WAYT 60.6
GTEX-13QBU-1926-SM-5IJEW 60.0
GTEX-145ME-0926-SM-5O9AR 58.1
GTEX-ZP4G-1626-SM-57WGD 57.8
GTEX-13O21-1026-SM-5IJDU 57.6
GTEX-XMK1-1826-SM-4B66F 57.1
GTEX-148VJ-2226-SM-5NQ9M 56.9
GTEX-11VI4-1626-SM-5EQKO 54.1
GTEX-1399U-2126-SM-5IFEZ 52.7
GTEX-13OVI-1926-SM-5IJCG 52.4
GTEX-ZQUD-0926-SM-57WE3 50.9
GTEX-ZF2S-1726-SM-57WFT 48.4
GTEX-WEY5-1526-SM-4LMJF 47.7
GTEX-Y3IK-1726-SM-4YCCR 47.4
GTEX-12WSK-1526-SM-5CVNO 45.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

182.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 182.8
FF:10024-101D6 15,40,85 years, mixed 182.8

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The Human Protein Atlas project is funded
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